RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 TBCCD1Q9NVR7 557 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 SRRDQ9UH36 339 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 OAS3Q9Y6K5 1087 aaKnown RBP8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 TRIM43BA6NCK2 446 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 AP3D1O14617 1153 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 TOR1BO14657 336 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 PRMT3O60678 531 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 GADD45GO95257 159 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 C9P02748 559 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 NOS3P29474 1203 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 CTNNB1P35222 781 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 BUD31P41223 144 aaPredicted RBP8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 HEPACAMQ14CZ8 416 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 ABRAXAS2Q15018 415 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 PCBP2Q15366 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 C6orf141Q5SZD1 244 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 MZT2BQ6NZ67 158 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 AKAP14Q86UN6 197 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 OXR1Q8N573 874 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 TMEM125Q96AQ2 219 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 SCLYQ96I15 445 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 CHCHD6Q9BRQ6 235 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 SERHL2Q9H4I8 314 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 TPT1P8Q9HAU6 139 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 SERHLQ9NQF3 203 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 ITM2CQ9NQX7 267 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 SEMA3GQ9NS98 782 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 GIN1Q9NXP7 522 aa8.38□□□□□ -1.07
HNRNPU-219ENST00000639628 TMEM189-UBE2V1I3L0A0 370 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 TMCC2O75069 709 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 CYBAP13498 195 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PRKACGP22612 351 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ACRV1P26436 265 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ELK4P28324 431 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 HOXC13P31276 330 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 TLX1P31314 330 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 FOXA1P55317 472 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 RCAN2Q14206 197 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 HKDC1Q2TB90 917 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 LRRC73Q5JTD7 316 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ZNF57Q68EA5 555 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 USP43Q70EL4 1123 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 C1orf52Q8N6N3 182 aaKnown RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 BEND7Q8N7W2 519 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PNPLA1Q8N8W4 532 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ARRDC2Q8TBH0 407 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ZNF514Q96K75 400 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PRDM8Q9NQV8 689 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 EXD2Q9NVH0 621 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SPO11Q9Y5K1 396 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 GMEB1Q9Y692 573 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ANKRD12Q6UB98 2062 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 LY75O60449 1722 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 H0Y858 1186 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 WNT9AO14904 365 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 GABBR2O75899 941 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 BCKDHAP12694 445 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 GGT1P19440 569 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 GRIA2P42262 883 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ERVPABLB-1P60509 514 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 KCNC3Q14003 757 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SLC14A2Q15849 920 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PLEKHS1Q5SXH7 462 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 C22orf39Q6P5X5 142 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 NCEH1Q6PIU2 408 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PLEKHM3Q6ZWE6 761 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 THOC6Q86W42 341 aaKnown RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 MFSD2AQ8NA29 543 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 VANGL1Q8TAA9 524 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 C9orf43Q8TAL5 461 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SH3RF2Q8TEC5 729 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 HTRA1Q92743 480 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 TFAP2CQ92754 450 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 ATOH8Q96SQ7 321 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 WRAP53Q9BUR4 548 aaKnown RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PDE4DIPQ5VU43 2346 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 HHLA1C9JL84 531 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 LATS1O95835 1130 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PRSS56P0CW18 603 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 PIK3CBP42338 1070 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SCARB2Q14108 478 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 TIGD6Q17RP2 521 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 SMU1Q2TAY7 513 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 GPRC6AQ5T6X5 926 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 DPP10Q8N608 796 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 KREMEN2Q8NCW0 462 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 XAGE5Q8WWM1 108 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 MAELQ96JY0 434 aaKnown RBP8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 HSH2DQ96JZ2 352 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 C3orf30Q96M34 536 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 CCDC3Q9BQI4 270 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 C3orf14Q9HBI5 128 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 AGPAT4Q9NRZ5 378 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 DEC1Q9P2X7 70 aa8.37□□□□□ -1.07
HNRNPU-219ENST00000639628 MTRRQ9UBK8 725 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms