RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 A6NIZ1 184 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 GUSBP08236 651 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 HPCAL1P37235 193 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 CDH15P55291 814 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 CHRNB3Q05901 458 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 NDUFAF7Q7L592 441 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 NOXA1Q86UR1 476 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 AMIGO1Q86WK6 493 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 EFCAB3Q8N7B9 438 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 FOXRED1Q96CU9 486 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-209ENST00000639244 RBBP8Q99708 897 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 MYL10Q9BUA6 226 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 NIF3L1Q9GZT8 377 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 RNPEPQ9H4A4 650 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 ANKRD19PQ9H560 264 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 MBIPQ9NS73 344 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 ZFP57Q9NU63 452 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 CACNA2D2Q9NY47 1150 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 MED11Q9P086 117 aa4.22□□□□□ -1.73
SCN3A-209ENST00000639244 LEF1Q9UJU2 399 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-209ENST00000639244 MYO5CQ9NQX4 1742 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 TMEM238C9JI98 176 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 UBE2CO00762 179 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 SGPL1O95470 568 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 NDST3O95803 873 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 GAAP10253 952 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 NQO2P16083 231 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 SAT1P21673 171 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 HSD11B1P28845 292 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 AHRP35869 848 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 CSKP41240 450 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 ARF6P62330 175 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 SIM1P81133 766 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-209ENST00000639244 OR2B11Q5JQS5 317 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 EXOSC6Q5RKV6 272 aaKnown RBP4.21□□□□□ -1.73
SCN3A-209ENST00000639244 HTR3DQ70Z44 454 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 P4HA3Q7Z4N8 544 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 Q8N9G6 341 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-209ENST00000639244 KBTBD8Q8NFY9 601 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 MEIS3Q99687 375 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 LRRC4Q9HBW1 653 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 FBXO34Q9NWN3 711 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 ELF5Q9UKW6 265 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF532Q9HCE3 1301 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 CC2D2AQ9P2K1 1620 aa4.21□□□□□ -1.73
SCN3A-209ENST00000639244 RIMS1Q86UR5 1692 aaKnown RBP4.21□□□□□ -1.73
SCN3A-209ENST00000639244 DISP3Q9P2K9 1392 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 A4D1N5 150 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 FAM86B1E9PN63 330 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 SOCS6O14544 535 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 SNAPC5O75971 98 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 CST3P01034 146 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 KLK3P07288 261 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 CBR1P16152 277 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 ACVR2AP27037 513 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 PEX2P28328 305 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 TGFBR2P37173 567 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 GPLD1P80108 840 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 GAGE1Q13065 139 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 KRT33BQ14525 404 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 PAN2Q504Q3 1202 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 HIKESHIQ53FT3 197 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 RNASE10Q5GAN6 216 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 ATAD3CQ5T2N8 411 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 ANKRD22Q5VYY1 191 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 CYB5R2Q6BCY4 276 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 TMEM126BQ8IUX1 230 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 SFT2D1Q8WV19 159 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 SLITRK1Q96PX8 696 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 WDR77Q9BQA1 342 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 C1QTNF3Q9BXJ4 246 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 MFRPQ9BY79 579 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 BHLHE41Q9C0J9 482 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 NXF3Q9H4D5 531 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 ZFP14Q9HCL3 533 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 TEX10Q9NXF1 929 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 N4BP2Q86UW6 1770 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 EMSYQ7Z589 1322 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 CXCL11O14625 94 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 RBMXL2O75526 392 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 GPX5O75715 221 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 UQCRFS1P1P0C7P4 283 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 NELFEP18615 380 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 MMP13P45452 471 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 METAP2P50579 478 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 KCNK10P57789 538 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 MTMR2Q13614 643 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 MTFR1Q15390 333 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 MAPK11Q15759 364 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 GOLGA7BQ2TAP0 167 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 NHSL2Q5HYW2 709 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 KHDRBS2Q5VWX1 349 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 KATNAL2Q8IYT4 538 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 GPR137CQ8N3F9 429 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 HM13Q8TCT9 377 aa4.21□□□□□ -1.74
SCN3A-209ENST00000639244 ACOT11Q8WXI4 607 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 LARP4BQ92615 738 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 DUS3LQ96G46 650 aaKnown RBP4.21□□□□□ -1.74
SCN3A-209ENST00000639244 FUBP3Q96I24 572 aaKnown RBP eCLIP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms