RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	PHOX2B	Q99453	314 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OSER1	Q9NX31	292 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SLC25A37	Q9NYZ2	338 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	KRT87P	A6NCN2	255 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FAM220BP	B1ANY3	271 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	KLK8	O60259	260 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CAPN1	P07384	714 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OGN	P20774	298 aa	Known RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	EPHA2	P29317	976 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ETV6	P41212	452 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FLT3LG	P49771	235 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RENBP	P51606	427 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SGO1	Q5FBB7	561 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR2T5	Q6IEZ7	315 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ERAP2	Q6P179	960 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	USP50	Q70EL3	339 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SNX20	Q7Z614	316 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR2T29	Q8NH02	315 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MYOC	Q99972	504 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RNF167	Q9H6Y7	350 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	C1orf109	Q9NX04	203 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CD274	Q9NZQ7	290 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ARVCF	O00192	962 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RPP40	O75818	363 aa	Known RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FKBP9	O95302	570 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	STC1	P52823	247 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	UGT2B15	P54855	530 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CSNK2B	P67870	215 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	NRG1	Q02297	640 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CREM	Q03060	361 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	TBCE	Q15813	527 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	LETMD1	Q6P1Q0	360 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	TRAF7	Q6Q0C0	670 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	DNASE1L2	Q92874	299 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514		Q96MT0	163 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	KRT84	Q9NSB2	600 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ERVK13-1	Q9NX77	482 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	PDP1	Q9P0J1	537 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	UXT	Q9UBK9	157 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ASB1	Q9Y576	335 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ARL5A	Q9Y689	179 aa		13.33	□□□□□ -0.28
KCNMA1-238	ENST00000638514	PDCD11	Q14690	1871 aa	Known RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MYADML2	A6NDP7	307 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514		H3BQ06	376 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	YES1	P07947	543 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SLC2A4	P14672	509 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	GRK5	P34947	590 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SOX6	P35712	828 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MAP2K5	Q13163	448 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	GTDC1	Q4AE62	458 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RFTN2	Q52LD8	501 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RAP1GAP2	Q684P5	730 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	C16orf59	Q7L2K0	433 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ZNF438	Q7Z4V0	828 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CCDC190	Q86UF4	302 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	TCAIM	Q8N3R3	496 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR5H6	Q8NGV6	325 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR4L1	Q8NH43	312 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RAET1E	Q8TD07	263 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	BRSK1	Q8TDC3	778 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FBXO32	Q969P5	355 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	TBC1D20	Q96BZ9	403 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FCRL2	Q96LA5	508 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SDHC	Q99643	169 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR51E2	Q9H255	320 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ZFP14	Q9HCL3	533 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	TBC1D24	Q9ULP9	559 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514		A0A096LPI6	279 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	PCDHGA12	O60330	932 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ODC1	P11926	461 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	HOXD10	P28358	340 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	C21orf33	P30042	268 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	HOXA9	P31269	272 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RRM2	P31350	389 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	HTR7	P34969	479 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MAGEA2	P43356	314 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ACVR1	Q04771	509 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ATG9B	Q674R7	924 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RTL3	Q8N8U3	475 aa	Known RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	OR13C4	Q8NGS5	318 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	NEDD4L	Q96PU5	975 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ABCG8	Q9H221	673 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	NARFL	Q9H6Q4	476 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	STMN3	Q9NZ72	180 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ABCG2	Q9UNQ0	655 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MCM3AP	O60318	1980 aa		13.32	□□□□□ -0.28
KCNMA1-238	ENST00000638514	HMX3	A6NHT5	357 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	E2F3	O00716	465 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	ZNF682	O95780	498 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	MMP2	P08253	660 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	FPR1	P21462	350 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	DNAJA1	P31689	397 aa	Known RBP	13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	RPL38	P63173	70 aa	Known RBP	13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	SEMG2	Q02383	582 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	PTGR1	Q14914	329 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	DUSP7	Q16829	419 aa		13.31	□□□□□ -0.28
KCNMA1-238	ENST00000638514	CTXN3	Q4LDR2	81 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms