RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MAN2B2Q9Y2E5 1009 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 NEUROG3Q9Y4Z2 214 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 RNF215Q9Y6U7 377 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 U3KQV3 271 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 EFCAB10A6NFE3 127 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 GSTA4O15217 222 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 SLC43A1O75387 559 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 HLA-FP30511 346 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 PXNP49023 591 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-221ENST00000638141 BLVRAP53004 296 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 GPR85P60893 370 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 UFM1P61960 85 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 ERVK-8P63133 956 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 COX10Q12887 443 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 MRPL28Q13084 256 aaKnown RBP11.71□□□□□ -0.53
CAPN3-221ENST00000638141 CTBP1Q13363 440 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 SAXO2Q658L1 398 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 SAMD7Q7Z3H4 446 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 PYROXD2Q8N2H3 581 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 NLGN4YQ8NFZ3 816 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-221ENST00000638141 DNASE1L2Q92874 299 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TEPSINQ96N21 525 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 FERD3LQ96RJ6 166 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TBL1YQ9BQ87 522 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 SHARPINQ9H0F6 387 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TREX1Q9NSU2 369 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 ABCB8Q9NUT2 735 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 PHF11Q9UIL8 331 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 ACSL5Q9ULC5 683 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 TSC2P49815 1807 aa11.71□□□□□ -0.53
CAPN3-221ENST00000638141 KCNK1O00180 336 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 HRO43593 1189 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 SULT1B1O43704 296 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 SH3BP5O60239 455 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 PCDHGA12O60330 932 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 HCN1O60741 890 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 IFNA7P01567 189 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 NFICP08651 508 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 CSF3P09919 207 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 RPS3P23396 243 aaKnown RBP eCLIP11.71□□□□□ -0.54
CAPN3-221ENST00000638141 RPS12P25398 132 aaKnown RBP11.71□□□□□ -0.54
CAPN3-221ENST00000638141 HOXA9P31269 272 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 SOX11P35716 441 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 ARHGDIAP52565 204 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 BCAT1P54687 386 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 CLDN20P56880 219 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 ERVK-21P61565 698 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 FLI1Q01543 452 aaPredicted RBP11.71□□□□□ -0.54
CAPN3-221ENST00000638141 GNASQ5JWF2 1037 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 C16orf62Q7Z3J2 963 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.54
CAPN3-221ENST00000638141 DNAJC22Q8N4W6 341 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 GPR151Q8TDV0 419 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 CHTF18Q8WVB6 975 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 NTAN1Q96AB6 310 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 ITCHQ96J02 903 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 C12orf42Q96LP6 360 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 SORCS2Q96PQ0 1159 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 PIGUQ9H490 435 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 LDAHQ9H6V9 325 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 RNF167Q9H6Y7 350 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 TRIM45Q9H8W5 580 aaPredicted RBP11.71□□□□□ -0.54
CAPN3-221ENST00000638141 STUB1Q9UNE7 303 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 PTGDR2Q9Y5Y4 395 aa11.71□□□□□ -0.54
CAPN3-221ENST00000638141 CIB4A0PJX0 185 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ELOVL7A1L3X0 281 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 WASHC1A8K0Z3 465 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CLCA1A8K7I4 914 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CXCR6O00574 342 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 AOC2O75106 756 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ANXA9O76027 345 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 LGI1O95970 557 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CLCN3P51790 818 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ARPP19P56211 112 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 MTPNP58546 118 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SCAPQ12770 1279 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PON2Q15165 354 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 EML3Q32P44 896 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ALFQ53S48 1182 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 KDELC1Q6UW63 502 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PAMR1Q6UXH9 720 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ISCA2Q86U28 154 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 UNC93AQ86WB7 457 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CCDC71Q8IV32 467 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ENTHD1Q8IYW4 607 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CPA6Q8N4T0 437 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FANK1Q8TC84 345 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 HRASLS5Q96KN8 279 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms