RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 UGDHO60701 494 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ERN1O75460 977 aaKnown RBP20.88■□□□□ 0.93
CLN6-224ENST00000638076 RAP2AP10114 183 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 PDHA2P29803 388 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 GSTT1P30711 240 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 NADK2Q4G0N4 442 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 FAM98BQ52LJ0 330 aaKnown RBP20.88■□□□□ 0.93
CLN6-224ENST00000638076 GCNT7Q6ZNI0 430 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ADGRD2Q7Z7M1 963 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ANKRD46Q86W74 232 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ATL1Q8WXF7 558 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 TESCQ96BS2 214 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 KCNH6Q9H252 994 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 RMND5AQ9H871 391 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 HPS4Q9NQG7 708 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 PADI4Q9UM07 663 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ELOVL7A1L3X0 281 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 CLOCKO15516 846 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 B3GALT4O96024 378 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 POU2F2P09086 479 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 ZNF23P17027 643 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 NOXRED1Q6NXP6 359 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 TRIM74Q86UV6 250 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 DNAJB8Q8NHS0 232 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 AURKBQ96GD4 344 aaPredicted RBP20.88■□□□□ 0.93
CLN6-224ENST00000638076 INPP5KQ9BT40 448 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 EBPLQ9BY08 206 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 KAT8Q9H7Z6 458 aaKnown RBP20.88■□□□□ 0.93
CLN6-224ENST00000638076 ADGRE2Q9UHX3 823 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 MAN2B2Q9Y2E5 1009 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 MYRFQ9Y2G1 1151 aa20.88■□□□□ 0.93
CLN6-224ENST00000638076 CROCCQ5TZA2 2017 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 H0Y858 1186 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 SLC16A8O95907 504 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 GSNP06396 782 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 RB1P06400 928 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 C7P10643 843 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 CHRNB3Q05901 458 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 DOC2AQ14183 400 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 LRIF1Q5T3J3 769 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 C9orf64Q5T6V5 341 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 FAM86B1Q8N7N1 296 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 TSPAN14Q8NG11 270 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 WDR20Q8TBZ3 569 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 MAGEE2Q8TD90 523 aaPredicted RBP20.87■□□□□ 0.93
CLN6-224ENST00000638076 ARRDC3Q96B67 414 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 ITCHQ96J02 903 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 MTERF1Q99551 399 aaKnown RBP20.87■□□□□ 0.93
CLN6-224ENST00000638076 OSBPL6Q9BZF3 934 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 PAPOLBQ9NRJ5 636 aaKnown RBP20.87■□□□□ 0.93
CLN6-224ENST00000638076 A0A096LPI6 279 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 H3BNH8 94 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 PLK4O00444 970 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 SOD1P00441 154 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 PCNAP12004 261 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 IMPA1P29218 277 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 SLC36A3Q495N2 470 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 FAM78AQ5JUQ0 283 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 GPR180Q86V85 440 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 FBXO30Q8TB52 745 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 CSGALNACT1Q8TDX6 532 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 RMND5BQ96G75 393 aaPredicted RBP20.87■□□□□ 0.93
CLN6-224ENST00000638076 FOPNLQ96NB1 174 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 OR4K3Q96R72 315 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 PKP4Q99569 1192 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 CARS2Q9HA77 564 aaKnown RBP20.87■□□□□ 0.93
CLN6-224ENST00000638076 DEC1Q9P2X7 70 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 GULP1Q9UBP9 304 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 LIMD1Q9UGP4 676 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 ZNF639Q9UID6 485 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 C5orf42Q9H799 3197 aa20.87■□□□□ 0.93
CLN6-224ENST00000638076 K7ESM1 405 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 ACPPP15309 386 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 ITGB7P26010 798 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 RPS9P46781 194 aaKnown RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 CSTF3Q12996 717 aaKnown RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 DDX39BQ13838 428 aaKnown RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 MAP7Q14244 749 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 HNRNPA1L2Q32P51 320 aaKnown RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 ATG9BQ674R7 924 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 ENPP6Q6UWR7 440 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 NLRP8Q86W28 1048 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 TMEM132CQ8N3T6 1108 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 CYGBQ8WWM9 190 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 NTN4Q9HB63 628 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 SMPD3Q9NY59 655 aaPredicted RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 GPRC5BQ9NZH0 403 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 VPS29Q9UBQ0 182 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 AP3M1Q9Y2T2 418 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 CXCR6O00574 342 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 NPC1O15118 1278 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 RECQL5O94762 991 aaPredicted RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 NFATC1O95644 943 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 MYF6P23409 242 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 CDKN2CP42773 168 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 GAB4Q2WGN9 574 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 TMEM214Q6NUQ4 689 aaKnown RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 TBPL2Q6SJ96 375 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 SFTPA1Q8IWL2 248 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 MICU2Q8IYU8 434 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms