RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ERVK-10P10266 1014 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 ENO3P13929 434 aaPredicted RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 TCP1P17987 556 aaKnown RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 CTBP1Q13363 440 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 TSTA3Q13630 321 aaPredicted RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 PTK6Q13882 451 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 ARHGAP19Q14CB8 494 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 CYP2A13Q16696 494 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 ACSBG2Q5FVE4 666 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 COLEC12Q5KU26 742 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 MRGPREQ86SM8 312 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 EFCAB3Q8N7B9 438 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLN6-221ENST00000637494 OR2L3Q8NG85 312 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 KCNJ9Q92806 393 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 FKBP10Q96AY3 582 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 VPS50Q96JG6 964 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 TRIM56Q9BRZ2 755 aaKnown RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 ZCWPW2A0A1B0GU75 182 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 A6NL46 340 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 TTLL8A6PVC2 850 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 VPS26AO75436 327 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 PSIP1O75475 530 aaKnown RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 CEACAM4O75871 244 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 ALBP02768 609 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 PDGFAP04085 211 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 MPC1LP0DKB6 136 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 PGAM1P18669 254 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 PSMB5P28074 263 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 MAGEA3P43357 314 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 CLCN7P51798 805 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 VSX2P58304 361 aaPredicted RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 IGFBP7Q16270 282 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 PAPD7Q5XG87 772 aaKnown RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 MRPL14Q6P1L8 145 aaKnown RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 DENND6AQ8IWF6 608 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 OR2A1Q8NGT9 310 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 INPP5DQ92835 1189 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 ACAT2Q9BWD1 397 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 MRPS30Q9NP92 439 aaKnown RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 ANKMY1Q9P2S6 941 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 NXT1Q9UKK6 140 aaKnown RBP18.17■□□□□ 0.5
CLN6-221ENST00000637494 KLK4Q9Y5K2 254 aa18.17■□□□□ 0.5
CLN6-221ENST00000637494 A0A0J9YVX5 310 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 ARHGEF33A8MVX0 844 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 MYO1CO00159 1063 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 ZBTB14O43829 449 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 TTC4O95801 387 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 SYF2O95926 243 aaKnown RBP18.16■□□□□ 0.5
CLN6-221ENST00000637494 ALPPP05187 535 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 ITGAXP20702 1163 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 SLC1A2P43004 574 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 WASHC2DQ5SRD0 308 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 LRRC8EQ6NSJ5 796 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 OVCH1Q7RTY7 1134 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 KCNMB4Q86W47 210 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 FDCSPQ8NFU4 85 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 NACC2Q96BF6 587 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 SIGLEC10Q96LC7 697 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 ZFYVE21Q9BQ24 234 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 NAT9Q9BTE0 207 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 WDR54Q9H977 334 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 GALPQ9UBC7 116 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 FBXO5Q9UKT4 447 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 DHRS7Q9Y394 339 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 SPTBP11277 2137 aa18.16■□□□□ 0.5
CLN6-221ENST00000637494 KRT87PA6NCN2 255 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 DNALI1O14645 258 aaPredicted RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 CTSVO60911 334 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 EIF2S1P05198 315 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 PNLIPRP1P54315 467 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 CUL1Q13616 776 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 FASTKQ14296 549 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 HSP90AA5PQ58FG0 334 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 RNASEH2BQ5TBB1 312 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 RUNDC3BQ96NL0 473 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 PKP4Q99569 1192 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 DPH7Q9BTV6 452 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 DDX47Q9H0S4 455 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 IARS2Q9NSE4 1012 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 P4HTMQ9NXG6 502 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 C5AR2Q9P296 337 aa18.15■□□□□ 0.5
CLN6-221ENST00000637494 ZC3H7BQ9UGR2 993 aaKnown RBP18.15■□□□□ 0.5
CLN6-221ENST00000637494 TENM4Q6N022 2769 aa18.14■□□□□ 0.5
CLN6-221ENST00000637494 A0A1W2PPV9 198 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 HYKKA2RU49 373 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 FITM1A5D6W6 292 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 EIF3FO00303 357 aaPredicted RBP18.14■□□□□ 0.49
CLN6-221ENST00000637494 VPS4BO75351 444 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 IPO13O94829 963 aaKnown RBP18.14■□□□□ 0.49
CLN6-221ENST00000637494 ERGP11308 486 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 MCM3P25205 808 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 GCGRP47871 477 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 RGS4P49798 205 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 MLLT10P55197 1068 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 MUM1Q2TAK8 710 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 DCAF10Q5QP82 559 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms