RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 OTOAQ7RTW8 1153 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 TTC29Q8NA56 475 aaPredicted RBP17.68■□□□□ 0.42
CLN6-220ENST00000637450 SKA2Q8WVK7 121 aaPredicted RBP17.68■□□□□ 0.42
CLN6-220ENST00000637450 BIRC8Q96P09 236 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 BARD1Q99728 777 aaKnown RBP17.68■□□□□ 0.42
CLN6-220ENST00000637450 KIFC1Q9BW19 673 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 SLC6A20Q9NP91 592 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 IL1RAPL1Q9NZN1 696 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 CCDC88CQ9P219 2028 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 ANKRD12Q6UB98 2062 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 HIVEP3Q5T1R4 2406 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 ARNTP27540 789 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 PSMB5P28074 263 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 CCNFP41002 786 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 BDKRB1P46663 353 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 VSX2P58304 361 aaPredicted RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 BASP1P80723 227 aaKnown RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 WASHC2DQ5SRD0 308 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 CUZD1Q86UP6 607 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 RAB42Q8N4Z0 105 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 OR2L3Q8NG85 312 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 FOPNLQ96NB1 174 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 MIPEPQ99797 713 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 MRM3Q9HC36 420 aaKnown RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 NXT1Q9UKK6 140 aaKnown RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 RUVBL2Q9Y230 463 aaKnown RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 PCDHGA10Q9Y5H3 936 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 HS3ST3B1Q9Y662 390 aa17.67■□□□□ 0.42
CLN6-220ENST00000637450 COPG1Q9Y678 874 aaKnown RBP17.67■□□□□ 0.42
CLN6-220ENST00000637450 A0A1W2PPV9 198 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 KRT87PA6NCN2 255 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 WIPF3A6NGB9 483 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 VSTM2BA6NLU5 285 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 VAPBO95292 243 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 OR1D4P47884 311 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 EIF3BP55884 814 aaKnown RBP17.66■□□□□ 0.42
CLN6-220ENST00000637450 FRMPD2BQ6IN97 320 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 LRRC8BQ6P9F7 803 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 IGFL2Q6UWQ7 119 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 CES3Q6UWW8 571 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 SHISA6Q6ZSJ9 500 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 GSTA5Q7RTV2 222 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 SDCCAG8Q86SQ7 713 aaPredicted RBP17.66■□□□□ 0.42
CLN6-220ENST00000637450 OR2A1Q8NGT9 310 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 MAGEC3Q8TD91 643 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 MFSD3Q96ES6 412 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 SOX17Q9H6I2 414 aaPredicted RBP17.66■□□□□ 0.42
CLN6-220ENST00000637450 SEMA3GQ9NS98 782 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 CTSFQ9UBX1 484 aa17.66■□□□□ 0.42
CLN6-220ENST00000637450 DOPEY1Q5JWR5 2465 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 LOC105369274A0A096LPK9 316 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 LOC102723532A0A0G2JNH3 316 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 HYKKA2RU49 373 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 ALOX12BO75342 701 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 MED26O95402 600 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 MATN4O95460 622 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 MGAT1P26572 445 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 FMO4P31512 558 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 KCNJ1P48048 391 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 GLRBP48167 497 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 CDK16Q00536 496 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 GBX1Q14549 363 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 MRNIPQ6NTE8 343 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 CNSTQ6PJW8 725 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 OR4N4Q8N0Y3 316 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 DTWD1Q8N5C7 304 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 METTL27Q8N6F8 245 aaPredicted RBP17.65■□□□□ 0.42
CLN6-220ENST00000637450 LPGAT1Q92604 370 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 TCF12Q99081 682 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 WDR77Q9BQA1 342 aaPredicted RBP17.65■□□□□ 0.42
CLN6-220ENST00000637450 SYBUQ9NX95 663 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 SPATA7Q9P0W8 599 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 ZC3H7BQ9UGR2 993 aaKnown RBP17.65■□□□□ 0.42
CLN6-220ENST00000637450 ERRFI1Q9UJM3 462 aaPredicted RBP17.65■□□□□ 0.42
CLN6-220ENST00000637450 MAU2Q9Y6X3 613 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 FAM169AQ9Y6X4 670 aa17.65■□□□□ 0.42
CLN6-220ENST00000637450 A0A0J9YVX5 310 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 ANKUB1A6NFN9 424 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 GOLGA8KD6RF30 607 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 H3BMM5 538 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 GOLGA8TH3BQL2 631 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 NRP2O60462 931 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 FGGP02679 453 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 TPSB2P20231 275 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 ATP5DP30049 168 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 ADARP55265 1226 aaKnown RBP17.64■□□□□ 0.41
CLN6-220ENST00000637450 FASTKQ14296 549 aaKnown RBP17.64■□□□□ 0.41
CLN6-220ENST00000637450 TPSAB1Q15661 275 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 RBBP7Q16576 425 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 TYSND1Q2T9J0 566 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 AGAP7PQ5VUJ5 663 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 FBXO42Q6P3S6 717 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 RNF44Q7L0R7 432 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 PARP9Q8IXQ6 854 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 OTUD6BQ8N6M0 293 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 OR11G2Q8NGC1 345 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 PPP4R1Q8TF05 950 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 MAIP1Q8WWC4 291 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms