RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 CLEC1BQ9P126 229 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 APOBEC3BQ9UH17 382 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 ZNHIT2Q9UHR6 403 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PRSS50Q9UI38 385 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SPATA2Q9UM82 520 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PLA2G4CQ9UP65 541 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ENTPD4Q9Y227 616 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 DTX4Q9Y2E6 619 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PLLPQ9Y342 182 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SF3B6Q9Y3B4 125 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 PCDHA2Q9Y5H9 948 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MAST3O60307 1309 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TRAV25A0A0B4J276 109 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TEX13CA0A0J9YWL9 993 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM237AA0A1B0GTK4 181 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 GSTTP1A0A1W2PQM5 241 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM149AA5PLN7 773 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ANKDD1BA6NHY2 528 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PDZK1P1A8MUH7 402 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TEX22C9J3V5 150 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RAB27BO00194 218 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 HAS3O00219 553 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ITGB1BP1O14713 200 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NRP1O14786 923 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 BIRC5O15392 142 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SEC14L5O43304 696 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ZNF208O43345 1280 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 B4GAT1O43505 415 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DFNA5O60443 496 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 STX10O60499 249 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 JAK2O60674 1132 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 LPXNO60711 386 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PAGE4O60829 102 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SCN2BO60939 215 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 VPS26AO75436 327 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CSDE1O75534 798 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 SUN1O94901 812 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ZFPL1O95159 310 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 APOL3O95236 402 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 LY86O95711 162 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TRUB2O95900 331 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 POMCP01189 267 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 KRT6AP02538 564 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FABP1P07148 127 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FTH1P19P0C7X4 201 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CCDC166P0CW27 439 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CYP2C9P11712 490 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PEPDP12955 493 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NQO2P16083 231 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ITGA2P17301 1181 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 POLR2CP19387 275 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 TNNI3P19429 210 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RAB4AP20338 218 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DDCP20711 480 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 UGT1A1P22309 533 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CCNOP22674 350 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ACVR2AP27037 513 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PIK3R1P27986 724 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CD6P30203 668 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 YWHABP31946 246 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 CD80P33681 288 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SLC26A3P40879 764 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 VIPR2P41587 438 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CAMPP49913 170 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 GNG10P50151 68 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SERPINH1P50454 418 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 HNRNPFP52597 415 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 ARSFP54793 590 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NLRP11P59045 1033 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 PRPS1P60891 318 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 YWHAGP61981 247 aaKnown RBP eCLIP2.92□□□□□ -1.94
VIM-210ENST00000637053 RPS15P62841 145 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 CSNK1G2P78368 415 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MAT1AQ00266 395 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 BNC1Q01954 994 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CYP24A1Q07973 514 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CUL3Q13618 768 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RCAN2Q14206 197 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RAB39AQ14964 217 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MFSD13AQ14CX5 517 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 HEPACAMQ14CZ8 416 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SHBQ15464 509 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MAPK11Q15759 364 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SSX2Q16385 188 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DPCR1Q3MIW9 517 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CATSPEREQ5SY80 951 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PDZK1Q5T2W1 519 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM171A1Q5VUB5 890 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NKAIN2Q5VXU1 208 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MFSD14CQ5VZR4 134 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PLCXD3Q63HM9 321 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 WSCD1Q658N2 575 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RFWD3Q6PCD5 774 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TSSK4Q6SA08 328 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TMEM182Q6ZP80 229 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 GADL1Q6ZQY3 521 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ANO5Q75V66 913 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 EIF3MQ7L2H7 374 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 TMPRSS9Q7Z410 1059 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms