RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SLC5A12Q1EHB4 618 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 ISXQ2M1V0 245 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 SNAP47Q5SQN1 464 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PHF19Q5T6S3 580 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CACHD1Q5VU97 1274 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 SULT1C3Q6IMI6 304 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CDHR3Q6ZTQ4 885 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 TRIM73Q86UV7 250 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CARFQ8N187 725 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 TMEM151AQ8N4L1 468 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CHCHD4Q8N4Q1 142 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 BANPQ8N9N5 519 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 OR2A1Q8NGT9 310 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 MED8Q96G25 268 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 APOPT1Q96IL0 206 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PPM1MQ96MI6 270 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 MAP3K3Q99759 626 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PITPNM3Q9BZ71 974 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 STMN4Q9H169 189 aaPredicted RBP15.44■□□□□ 0.06
CLN6-216ENST00000636876 TMBIM4Q9HC24 238 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 C1GALT1Q9NS00 363 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 WWOXQ9NZC7 414 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 SEMA5BQ9P283 1151 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CPSF2Q9P2I0 782 aaKnown RBP15.44■□□□□ 0.06
CLN6-216ENST00000636876 PTBP2Q9UKA9 531 aaKnown RBP15.44■□□□□ 0.06
CLN6-216ENST00000636876 EMCNQ9ULC0 261 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 GRID1Q9ULK0 1009 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CLCA2Q9UQC9 943 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PCDHB11Q9Y5F2 797 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PCM1Q15154 2024 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 SNRNP200O75643 2136 aaKnown RBP15.44■□□□□ 0.06
CLN6-216ENST00000636876 A0A0J9YY10 115 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 A8MU76 341 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TARM1B6A8C7 271 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TMX2-CTNND1H3BSU7 103 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 MAP2K7O14733 419 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TOX3O15405 576 aaPredicted RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 TAPBPO15533 448 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 RASSF9O75901 435 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 FKBP9O95302 570 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 SBK3P0C264 359 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 ANKRD34CP0C6C1 535 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 GFAPP14136 432 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 CDH3P22223 829 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 GGT5P36269 586 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 SLC6A12P48065 614 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 LSSP48449 732 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 SF1Q15637 639 aaKnown RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 C18orf21Q32NC0 220 aaPredicted RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 PTCHD3Q3KNS1 767 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 THEMIS2Q5TEJ8 643 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 CAPN13Q6MZZ7 669 aaPredicted RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 ARHGAP22Q7Z5H3 698 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 EXOC3L1Q86VI1 746 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 KLHDC8AQ8IYD2 350 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 GALNT15Q8N3T1 639 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 PYCR2Q96C36 320 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 MIPEPQ99797 713 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TMEM79Q9BSE2 394 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 ACAT2Q9BWD1 397 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 PCBD2Q9H0N5 130 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 CNOT10Q9H9A5 744 aaKnown RBP15.43■□□□□ 0.06
CLN6-216ENST00000636876 ABCF3Q9NUQ8 709 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TAC3Q9UHF0 121 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 TMCO1Q9UM00 188 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 CEP295Q9C0D2 2601 aa15.43■□□□□ 0.06
CLN6-216ENST00000636876 PTPRBP23467 1997 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 IGHV5-51A0A0C4DH38 117 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 KLK8O60259 260 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 PLIN3O60664 434 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 SMIM24O75264 130 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 SPAG7O75391 227 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 IPO13O94829 963 aaKnown RBP15.42■□□□□ 0.06
CLN6-216ENST00000636876 CCNDBP1O95273 360 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 PROCP04070 461 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 JUPP14923 745 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 CREB1P16220 341 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 HSPA7P48741 367 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 ALDH18A1P54886 795 aaKnown RBP15.42■□□□□ 0.06
CLN6-216ENST00000636876 SETDB1Q15047 1291 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 PRAMEF13Q5VWM6 474 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 TMPRSS7Q7RTY8 843 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 FAM20CQ8IXL6 584 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 FBXO39Q8N4B4 442 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 OR2L3Q8NG85 312 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 UBTD2Q8WUN7 234 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 KLHL6Q8WZ60 621 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 GRAMD1AQ96CP6 724 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 STRADBQ9C0K7 418 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 ZNF768Q9H5H4 540 aaKnown RBP15.42■□□□□ 0.06
CLN6-216ENST00000636876 INTS7Q9NVH2 962 aaKnown RBP15.42■□□□□ 0.06
CLN6-216ENST00000636876 ZNF446Q9NWS9 450 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 ACTL7BQ9Y614 415 aa15.42■□□□□ 0.06
CLN6-216ENST00000636876 SLC9B1P1A6NJY1 282 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 HGSO14964 777 aaPredicted RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 SASH3O75995 380 aa15.41■□□□□ 0.06
CLN6-216ENST00000636876 ZBTB11O95625 1053 aaPredicted RBP15.41■□□□□ 0.06
CLN6-216ENST00000636876 PVRP15151 417 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms