RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DHX40Q8IX18 779 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 CFAP206Q8IYR0 622 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 BATF2Q8N1L9 274 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PAQR4Q8N4S7 273 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ANKRD44Q8N8A2 993 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ADPRHL1Q8NDY3 354 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 C17orf47Q8NEP4 570 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 SPATA4Q8NEY3 305 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 OR52N4Q8NGI2 321 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 RAB3IL1Q8TBN0 382 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ATP8B4Q8TF62 1192 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 CCDC12Q8WUD4 166 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TSEN15Q8WW01 171 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 RHBDF1Q96CC6 855 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ARSGQ96EG1 525 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 CHMP6Q96FZ7 201 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 SNF8Q96H20 258 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 NSMCE2Q96MF7 247 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TMEM68Q96MH6 324 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 WDFY2Q96P53 400 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TRNT1Q96Q11 434 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 WDR83Q9BRX9 315 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 SHCBP1LQ9BZQ2 653 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PKIBQ9C010 78 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 GPR88Q9GZN0 384 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 FAM192AQ9GZU8 254 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 RAB17Q9H0T7 212 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 P2RY12Q9H244 342 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TTYH1Q9H313 450 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PCDH9Q9HC56 1237 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TRPC7Q9HCX4 862 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 FARSBQ9NSD9 589 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 DDX28Q9NUL7 540 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PANK4Q9NVE7 773 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ETNK2Q9NVF9 386 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 THAP1Q9NVV9 213 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ASNSD1Q9NWL6 643 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 FAM118AQ9NWS6 357 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 GDE1Q9NZC3 331 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PEF1Q9UBV8 284 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 FBXL17Q9UF56 701 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 KCNN3Q9UGI6 736 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 CDH22Q9UJ99 828 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 GMEB2Q9UKD1 530 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 NENFQ9UMX5 172 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 CDC14AQ9UNH5 594 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 GDAQ9Y2T3 454 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PKP3Q9Y446 797 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 HBS1LQ9Y450 684 aaKnown RBP2.88□□□□□ -1.95
PSPC1-208ENST00000635562 PFASO15067 1338 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 ACEP12821 1306 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 TTC21AQ8NDW8 1320 aa2.88□□□□□ -1.95
PSPC1-208ENST00000635562 LOC102723996A0A087X1L8 192 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 WDR91A4D1P6 747 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 SH2D7A6NKC9 451 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 LINC01548A6NM66 108 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 F8W810 466 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 UBE2Q2LH0YL09 131 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 PSMD11O00231 422 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF197O14709 1029 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 HS3ST1O14792 307 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 XPO1O14980 1071 aaKnown RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 LSM1O15116 133 aaKnown RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 POLR1CO15160 346 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 AKR7A2O43488 359 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 HCRTR2O43614 444 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 TRAPPC3O43617 180 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 SSX5O60225 188 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 TBX19O60806 448 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 B4GALT2O60909 372 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 DNAJB6O75190 326 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 TOM1L1O75674 476 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ATP5HO75947 161 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 CLPXO76031 633 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 MYO1DO94832 1006 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ERLIN2O94905 339 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 BMP15O95972 392 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 SERPINA3P01011 423 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 IL1BP01584 269 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 APOA1P02647 267 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ENO1P06733 434 aaKnown RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 IGFBP1P08833 259 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ALOX5P09917 674 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 IQCF3P0C7M6 154 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 C8orf89P0DMQ9 161 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 OR8G3PP0DMU2 310 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 F3P13726 295 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 COX7A2P14406 83 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 PRKACAP17612 351 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ITIH1P19827 911 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 DRD5P21918 477 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 TGM2P21980 687 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 YWHAQP27348 245 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 CDC25CP30307 473 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 KCNJ1P48048 391 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 ENTPD1P49961 510 aa2.87□□□□□ -1.95
PSPC1-208ENST00000635562 GDI2P50395 445 aaKnown RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 SUCLG1P53597 346 aaKnown RBP2.87□□□□□ -1.95
PSPC1-208ENST00000635562 GPX6P59796 221 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms