RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 HAGHLQ6PII5 290 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TRABD2AQ86V40 505 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TMEM125Q96AQ2 219 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 C12orf43Q96C57 262 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SYN3O14994 580 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ATG12O94817 140 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ETS2P15036 469 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ARSKQ6UWY0 536 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 C3P1Q6ZMU1 363 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CFAP206Q8IYR0 622 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CYP3A7-CYP3A51PA0A087WV96 503 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CXCL14O95715 111 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 IFI30P13284 250 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CYP3A7P24462 503 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZFPM1Q8IX07 1006 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■■■■ 27.9
SYNGAP1-208ENST00000629380 CIB1Q99828 191 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 WRAP53Q9BUR4 548 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 M0QX08 132 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF14P17017 642 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 PGDP52209 483 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TMCO2Q7Z6W1 182 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF101Q8IZC7 436 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 DKKL1Q9UK85 242 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF99A8MXY4 864 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CASP7P55210 303 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SPPL2BQ8TCT7 592 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 FEM1CQ96JP0 617 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TXN2Q99757 166 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 POLMQ9NP87 494 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TNFRSF10DQ9UBN6 386 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 PAPSS1O43252 624 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 NPHS1O60500 1241 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 GRIA2P42262 883 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 TLE2Q04725 743 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 NIPAL1Q6NVV3 410 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 NUDT13Q86X67 352 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 C1orf109Q9NX04 203 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CLCA3PQ9Y6N3 262 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CLCA1A8K7I4 914 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF35P13682 527 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ACTR1AP61163 376 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PAQR7Q86WK9 346 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 SASH3O75995 380 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 YES1P07947 543 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PTGER3P43115 390 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PLGLB1Q02325 96 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 MAB21L1Q13394 359 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 LRRN1Q6UXK5 716 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 DNAAF1Q8NEP3 725 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 HSPA12BQ96MM6 686 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 KLRF1Q9NZS2 232 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 LYPLA1O75608 230 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 TSPAN8P19075 237 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 RPL10P27635 214 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ISLR2Q6UXK2 745 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF517Q6ZMY9 492 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 DPAGT1Q9H3H5 408 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 XRN1Q8IZH2 1706 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 PRKD3O94806 890 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC16A8O95907 504 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 RFC2P35250 354 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 FXYD6-FXYD2A0A087WZ82 144 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ARPC2O15144 300 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CSTF2P33240 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ARHGAP12Q8IWW6 846 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 LPIN3Q9BQK8 851 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 FXYD6Q9H0Q3 95 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 RCBTB2O95199 551 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 MPSTP25325 297 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CD47Q08722 323 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 DECR1Q16698 335 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 CEP290O15078 2479 aa12.9□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.35
SYNGAP1-208ENST00000629380 CLEC3AO75596 197 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms