RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HNRNPFP52597 415 aaKnown RBP21.39■■□□□ 1.01
PNKP-220ENST00000627232 AAK1Q2M2I8 961 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 CRTC3Q6UUV7 619 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.39■■□□□ 1.01
PNKP-220ENST00000627232 MSANTD1Q6ZTZ1 278 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 TRMT11Q7Z4G4 463 aaKnown RBP21.39■■□□□ 1.01
PNKP-220ENST00000627232 SPPL2CQ8IUH8 684 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 KRTCAP2Q8N6L1 136 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 ZNF480Q8WV37 535 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 CANT1Q8WVQ1 401 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 GATA6Q92908 595 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 APIPQ96GX9 242 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 RPP25Q9BUL9 199 aaKnown RBP21.39■■□□□ 1.01
PNKP-220ENST00000627232 VCXQ9H320 206 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 SPATA6Q9NWH7 488 aaPredicted RBP21.39■■□□□ 1.01
PNKP-220ENST00000627232 PCDHGA11Q9Y5H2 935 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 TICRRQ7Z2Z1 1910 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 DHRS12A0PJE2 317 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 H0YJX3 145 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 HNRNPRO43390 633 aaKnown RBP21.38■■□□□ 1.01
PNKP-220ENST00000627232 PRMT3O60678 531 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 SDC1P18827 310 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 IL10P22301 178 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 PSMA4P25789 261 aaKnown RBP21.38■■□□□ 1.01
PNKP-220ENST00000627232 WASP42768 502 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 KIR2DL1P43626 348 aaPredicted RBP21.38■■□□□ 1.01
PNKP-220ENST00000627232 CDK3Q00526 305 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 C10orf62Q5T681 223 aaPredicted RBP21.38■■□□□ 1.01
PNKP-220ENST00000627232 ZNF776Q68DI1 518 aaPredicted RBP21.38■■□□□ 1.01
PNKP-220ENST00000627232 HEATR4Q86WZ0 1026 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 HDDC3Q8N4P3 179 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 LRTOMTQ8WZ04 291 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 WDR34Q96EX3 536 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 PPM1MQ96MI6 270 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 OR52E6Q96RD3 313 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 SH3GL1Q99961 368 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 SGPP1Q9BX95 441 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 TRIM8Q9BZR9 551 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 OR52A5Q9H2C5 316 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 RAB26Q9ULW5 256 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 MAN2B2Q9Y2E5 1009 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 NEUROG3Q9Y4Z2 214 aa21.38■■□□□ 1.01
PNKP-220ENST00000627232 GPR89AB7ZAQ6 455 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 K7EQS6 105 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 PCDH8O95206 1070 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 GPR89BP0CG08 455 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 S100A3P33764 101 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 MED21Q13503 144 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 NFE2L1Q14494 772 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 WSCD2Q2TBF2 565 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 C2orf27AQ580R0 203 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 SLCO4C1Q6ZQN7 724 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 ERMP1Q7Z2K6 904 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 LRRTM4Q86VH4 590 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 IFNEQ86WN2 208 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 OXR1Q8N573 874 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 NUDT8Q8WV74 236 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 REPS1Q96D71 796 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 APOLD1Q96LR9 279 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 HHIPQ96QV1 700 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 ZDHHC5Q9C0B5 715 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 RMND5AQ9H871 391 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 VPS29Q9UBQ0 182 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 MAGEL2Q9UJ55 1249 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 RUVBL1Q9Y265 456 aaKnown RBP21.37■■□□□ 1.01
PNKP-220ENST00000627232 TMEM98Q9Y2Y6 226 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 TRPM6Q9BX84 2022 aa21.37■■□□□ 1.01
PNKP-220ENST00000627232 TCRBV5S2A0A599 114 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 KLHL33A6NCF5 533 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 ERN1O75460 977 aaKnown RBP21.36■■□□□ 1.01
PNKP-220ENST00000627232 PCCBP05166 539 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 TBPL1P62380 186 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 DPY19L1Q2PZI1 675 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 NOXRED1Q6NXP6 359 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 PDZD3Q86UT5 571 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 AMZ2Q86W34 360 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 RIMKLAQ8IXN7 391 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 LRRC56Q8IYG6 542 aaPredicted RBP21.36■■□□□ 1.01
PNKP-220ENST00000627232 SYTL1Q8IYJ3 562 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 ADGRG5Q8IZF4 528 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 ERLEC1Q96DZ1 483 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 TEX101Q9BY14 249 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 OSBPL6Q9BZF3 934 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 KCNH6Q9H252 994 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 EHD1Q9H4M9 534 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 Q9H521 79 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 FBRSQ9HAH7 460 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 SGK2Q9HBY8 427 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 DYRK1BQ9Y463 629 aa21.36■■□□□ 1.01
PNKP-220ENST00000627232 DENRO43583 198 aaKnown RBP21.35■■□□□ 1.01
PNKP-220ENST00000627232 BMP2P12643 396 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 SOX9P48436 509 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 C21orf58P58505 322 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 RUNDC3AQ59EK9 446 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 TBCELQ5QJ74 424 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 LRIF1Q5T3J3 769 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 ANKFN1Q8N957 763 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 TNIP2Q8NFZ5 429 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 CLHC1Q8NHS4 586 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 SETD7Q8WTS6 366 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms