RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 TBC1D17Q9HA65 648 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 MCUBQ9NWR8 336 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 FLRT1Q9NZU1 646 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 RPP38P78345 283 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 DUOXA1Q1HG43 343 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 RNASE12Q5GAN4 147 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 GPC2Q8N158 579 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 PCSK9Q8NBP7 692 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 OSGEPL1Q9H4B0 414 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 HSPE1-MOB4S4R3N1 261 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 TCRBV5S1A1TA0A578 114 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 CENPBD1B2RD01 187 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 LOC730098B7Z3J9 87 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 NME6O75414 186 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 GGT1P19440 569 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 CSTF2P33240 577 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■■■□ 20.4
FARP1-242ENST00000627049 TAS2R41P59536 307 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 GANABQ14697 944 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 CXorf57Q6NSI4 855 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 ITIH5Q86UX2 942 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 NPWQ8N729 165 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 GSTO2Q9H4Y5 243 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 GPN2Q9H9Y4 310 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 CACNG4Q9UBN1 327 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 EVLQ9UI08 416 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 GRIP1Q9Y3R0 1128 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 CCNYL3P0C7X3 344 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 SMAD3P84022 425 aaKnown RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 RFTN2Q52LD8 501 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 ENPP6Q6UWR7 440 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 GRIN3AQ8TCU5 1115 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 TRPM4Q8TD43 1214 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 ACDQ96AP0 544 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 FAIM2Q9BWQ8 316 aa17.29■□□□□ 0.36
FARP1-242ENST00000627049 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
FARP1-242ENST00000627049 ARL5CA6NH57 179 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 OR6C75A6NL08 312 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 OPN1SWP03999 348 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 GDF5P43026 501 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 ST3GAL4Q11206 333 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 KANK2Q63ZY3 851 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 FBXL22Q6P050 247 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 XAGE5Q8WWM1 108 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 MTERF1Q99551 399 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 AKAP7Q9P0M2 348 aaPredicted RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 CLEC4AQ9UMR7 237 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 ZNF510Q9Y2H8 683 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 MYO18AQ92614 2054 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 MANBAO00462 879 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 PLOD2O00469 737 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 CSF2P04141 144 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 RPN2P04844 631 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 MAPK12P53778 367 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 CAPN13Q6MZZ7 669 aaPredicted RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 TMEM203Q969S6 136 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 ZNF486Q96H40 463 aaPredicted RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 SLC29A3Q9BZD2 475 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 RAD18Q9NS91 495 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 PIRO00625 290 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 NUAK1O60285 661 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 KHDRBS3O75525 346 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 CDRT1O95170 752 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 WEE1P30291 646 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 HNRNPFP52597 415 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 SCAPQ12770 1279 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 SEMA3AQ14563 771 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 LARP4Q71RC2 724 aaKnown RBP eCLIP17.28■□□□□ 0.36
FARP1-242ENST00000627049 RPL10LQ96L21 214 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 OAS3Q9Y6K5 1087 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 KCNE1P15382 129 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 MATN1P21941 496 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 MAGEA3P43357 314 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 PSMD4P55036 377 aaKnown RBP17.28■□□□□ 0.36
FARP1-242ENST00000627049 MAPKAP1Q9BPZ7 522 aa17.28■□□□□ 0.36
FARP1-242ENST00000627049 I3L521 148 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 URODP06132 367 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 C8GP07360 202 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 FGF4P08620 206 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 GMFBP60983 142 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 ARHGAP1Q07960 439 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 ASPNQ9BXN1 380 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 TTYH1Q9H313 450 aaPredicted RBP17.27■□□□□ 0.36
FARP1-242ENST00000627049 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 PAK6Q9NQU5 681 aaPredicted RBP17.27■□□□□ 0.36
FARP1-242ENST00000627049 BAIAP2Q9UQB8 552 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 CACNA1SQ13698 1873 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 TLR4O00206 839 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 DLGAP1O14490 977 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 GLUD1P00367 558 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 CLCN4P51793 760 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 HSF2Q03933 536 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 NHSL2Q5HYW2 709 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 PAGE3Q5JUK9 113 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 NDNFQ8TB73 568 aa17.27■□□□□ 0.36
FARP1-242ENST00000627049 ANKRD49Q8WVL7 239 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms