RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PBX3P40426 434 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 MAP2K4P45985 399 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 OCLNQ16625 522 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 FAM151BQ6UXP7 276 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 SIMC1Q8NDZ2 872 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.01
VCL-206ENST00000623461 SCGB3A2Q96PL1 93 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 BCL2L14Q9BZR8 327 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 IFT46Q9NQC8 304 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 THG1LQ9NWX6 298 aaKnown RBP8.71□□□□□ -1.01
VCL-206ENST00000623461 MAT2BQ9NZL9 334 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 FBXW11Q9UKB1 542 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 DISC1C4P0D8 188 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 LRRN3E7EW58 273 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 RYKP34925 604 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 PGDP52209 483 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 TAS2R43P59537 309 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 UFM1P61960 85 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 GRB14Q14449 540 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 HLA-DQA1Q5Y7H0 255 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 OR10H4Q8NGA5 316 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 OR4C6Q8NH72 309 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 DNAJB3Q8WWF6 145 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 MYRFLQ96LU7 910 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 FAM129BQ96TA1 746 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 TSNAXQ99598 290 aaKnown RBP8.71□□□□□ -1.01
VCL-206ENST00000623461 PPIL3Q9H2H8 161 aaKnown RBP8.71□□□□□ -1.01
VCL-206ENST00000623461 LRRN3Q9H3W5 708 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 SLC17A6Q9P2U8 582 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 ZNF451Q9Y4E5 1061 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 HMX3A6NHT5 357 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 PPEF2O14830 753 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 PRKYO43930 277 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 GATBO75879 557 aaKnown RBP8.71□□□□□ -1.01
VCL-206ENST00000623461 ENGP17813 658 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 TRAM1Q15629 374 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 KCNJ8Q15842 424 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 ATG9BQ674R7 924 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 LRRC66Q68CR7 880 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 PRSS48Q7RTY5 328 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 DENND1CQ8IV53 801 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 METTL25Q8N6Q8 603 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 TMIGD2Q96BF3 282 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 NXPE2Q96DL1 559 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 PPA2Q9H2U2 334 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 SETD1AO15047 1707 aaKnown RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 SDHDO14521 159 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 ARL2P36404 184 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 HCAR3P49019 387 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 TAF1AQ15573 450 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 LRRN1Q6UXK5 716 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 ABHD15Q6UXT9 468 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 PAQR7Q86WK9 346 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 SLC29A3Q9BZD2 475 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 NUMA1Q14980 2115 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 SPATA31A1Q5TZJ5 1347 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 CAPN14A8MX76 684 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 E9PAM4 449 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 CPN2P22792 545 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 RGS8P57771 180 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 TCEAL5Q5H9L2 206 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 NCBP2-AS2Q69YL0 99 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 ADAMTS15Q8TE58 950 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 XAGE5Q8WWM1 108 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 S100PBPQ96BU1 408 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 PFDN5Q99471 154 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 ZNF350Q9GZX5 532 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 TRIM36Q9NQ86 728 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 COPZ2Q9P299 210 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 ABHD14A-ACY1A0A1B0GW23 586 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 C5orf51A6NDU8 294 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 NEMP2A6NFY4 417 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 POMCP01189 267 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 SAGP10523 405 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 BTN3A2P78410 334 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 SERPINA13PQ6UXR4 307 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 LDB1Q86U70 411 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 MON1AQ86VX9 555 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 TMC8Q8IU68 726 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 PDZD9Q8IXQ8 264 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 Q8N402 240 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 RNF31Q96EP0 1072 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 MED30Q96HR3 178 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 BTN2A3PQ96KV6 586 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 GBA2Q9HCG7 927 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 BRD7Q9NPI1 651 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 CLDN5O00501 218 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 HCN1O60741 890 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 TRIM3O75382 744 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 ZNF157P51786 506 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 CTBP2P56545 445 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms