RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 LOC110117498-PIK3R3F6TDL0 507 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 RAMP2O60895 175 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SEMA3DO95025 777 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 B3GALT4O96024 378 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 VIPP01282 170 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 DDOSTP39656 456 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SLC15A1P46059 708 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 GNPDA1P46926 289 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 LIMK1P53667 647 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SERINC3Q13530 473 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CAMK2GQ13555 558 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 GPR50Q13585 617 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SGO1Q5FBB7 561 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ZCCHC8Q6NZY4 707 aaKnown RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 FAHD1Q6P587 224 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 Q6ZPB1 254 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 NRARPQ7Z6K4 114 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 GALNT10Q86SR1 603 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ANKRD46Q86W74 232 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CIR1Q86X95 450 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 TMEM132CQ8N3T6 1108 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 SIMC1Q8NDZ2 872 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 MDGA1Q8NFP4 955 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ZNF675Q8TD23 568 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 PIK3R3Q92569 461 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SLC39A13Q96H72 371 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SMIM14Q96QK8 99 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 KCNH6Q9H252 994 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 LRTM1Q9HBL6 345 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 COMMD10Q9Y6G5 202 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 IQCF5A8MTL0 148 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 E5RI56 91 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 EIF3FO00303 357 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 SLC28A1O00337 649 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 TNFRSF10BO14763 440 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SEMG1P04279 462 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CDK1P06493 297 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ODC1P11926 461 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 PTPN6P29350 595 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 CDKN2CP42773 168 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 HSPA7P48741 367 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 STARD3Q14849 445 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SMU1Q2TAY7 513 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 DUSP28Q4G0W2 176 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 NEDD4LQ96PU5 975 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 WDR70Q9NW82 654 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 TAS2R9Q9NYW1 312 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 BTBD3Q9Y2F9 522 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 FNDC3AQ9Y2H6 1198 aaKnown RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 ANGPTL3Q9Y5C1 460 aa13.74□□□□□ -0.21
LDB3-209ENST00000623056 GPR182O15218 404 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 TREHO43280 583 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 HOXB9P17482 250 aaPredicted RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 CD9P21926 228 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 PIK3CBP42338 1070 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 GALK2Q01415 458 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 USP39Q53GS9 565 aaKnown RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 GPR153Q6NV75 609 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 SBSNQ6UWP8 590 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 DNAJB8Q8NHS0 232 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 KCNJ9Q92806 393 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 GGHQ92820 318 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 LPPQ93052 612 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 HRASLS5Q96KN8 279 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 OR2A14Q96R47 310 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 TTYH2Q9BSA4 534 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CCDC32Q9BV29 185 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 MAN2B2Q9Y2E5 1009 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 PATJQ8NI35 1801 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 IGLV3-10A0A075B6K4 115 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 PRAMEF11O60813 436 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 BCKDHAP12694 445 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 MC4RP32245 332 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 S100A3P33764 101 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CA5AP35218 305 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CA8P35219 290 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 TTPAP49638 278 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 TBX4P57082 545 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 GNG2P59768 71 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 FBXL22Q6P050 247 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms