RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
CLTCL1-212ENST00000622493 ZDBF2Q9HCK1 2354 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SDHDO14521 159 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 VPS4BO75351 444 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PKLRP30613 574 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 HNF4AP41235 474 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SLC19A1P41440 591 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 DPP6P42658 865 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 IFT88Q13099 833 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 CHIT1Q13231 466 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 FASTKQ14296 549 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PRAMEF13Q5VWM6 474 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 FITM2Q8N6M3 262 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 AVL9Q8NBF6 648 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 CCT6BQ92526 530 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 IL17FQ96PD4 163 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 WDR55Q9H6Y2 383 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 MRGBPQ9NV56 204 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 OR6C2Q9NZP2 312 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PILRBQ9UKJ0 227 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 RNF11Q9Y3C5 154 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 BDP1A6H8Y1 2624 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PIP5K1BO14986 540 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 ULK1O75385 1050 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 VIPP01282 170 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 KRT6AP02538 564 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 KRT6BP04259 564 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 JUPP14923 745 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SHMT2P34897 504 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 HOXD12P35452 270 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 KRT6CP48668 564 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 TCEA2Q15560 299 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 LSM12Q3MHD2 195 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 XKR6Q5GH73 641 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 THEMIS2Q5TEJ8 643 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 ALYREFQ86V81 257 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 DDIASQ8IXT1 998 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 NAGSQ8N159 534 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 ZBTB44Q8NCP5 570 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 NEIL2Q969S2 332 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SH3KBP1Q96B97 665 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 WDR34Q96EX3 536 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 PTCD3Q96EY7 689 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 OR52B2Q96RD2 323 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 TUBB1Q9H4B7 451 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 ACTR5Q9H9F9 607 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SLC40A1Q9NP59 571 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
CLTCL1-212ENST00000622493 KCNE1BA0A087WTH5 132 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 GOLGA8QA0A0J9YX86 632 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 GOLGA8OA6NCC3 632 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 E7EQ34 232 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 GOLGA8NF8WBI6 632 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 CELA2BP08218 269 aaPredicted RBP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 C1orf61Q13536 156 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 TSTA3Q13630 321 aaPredicted RBP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 CPSF6Q16630 551 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 XKR7Q5GH72 579 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 GRHL2Q6ISB3 625 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 LARP4Q71RC2 724 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 CEP68Q76N32 757 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 CLNKQ7Z7G1 428 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 SLC9B2Q86UD5 537 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 TRIM48Q8IWZ4 208 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 SLC5A11Q8WWX8 675 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 USP7Q93009 1102 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 EFCAB11Q9BUY7 163 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 ABCF3Q9NUQ8 709 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 RIC8BQ9NVN3 520 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 CPNE7Q9UBL6 633 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 ZFP69BQ9UJL9 534 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 DOLKQ9UPQ8 538 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 ICKQ9UPZ9 632 aa13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 ARHGEF17Q96PE2 2063 aaPredicted RBP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 TNRC6BQ9UPQ9 1833 aaKnown RBP13.75□□□□□ -0.21
CLTCL1-212ENST00000622493 A0A1B0GVT2 93 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 SERTM1A2A2V5 107 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 H0YIV9 168 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 AQP9O43315 295 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 PRAMEF4O60810 478 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 GPR37L1O60883 481 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 CTSKP43235 329 aa13.74□□□□□ -0.21
CLTCL1-212ENST00000622493 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms