RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SPPL3Q8TCT6 385 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 KIAA1191Q96A73 305 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SLC22A12Q96S37 553 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 PKD1L3Q7Z443 1732 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 NWD2Q9ULI1 1742 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 FAM149AA5PLN7 773 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SRPRAP08240 638 aaKnown RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 C8orf89P0DMQ9 161 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ADRB3P13945 408 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 PRPS1L1P21108 318 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 CXCL12P48061 93 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 IDH3AP50213 366 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ELF3P78545 371 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 PCDH1Q08174 1060 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 DSC1Q08554 894 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SIM2Q14190 667 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 FAM91A1Q658Y4 838 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 ERICH5Q6P6B1 374 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ZNF761Q86XN6 746 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 FAM98AQ8NCA5 519 aaKnown RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 MAPK15Q8TD08 544 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 AGAP11Q8TF27 550 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 NMD3Q96D46 503 aaKnown RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 CMTM7Q96FZ5 175 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 FETUBQ9UGM5 382 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 DHRS7Q9Y394 339 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ITGB4P16144 1822 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SRRM3A6NNA2 597 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 ATF6P18850 670 aa9□□□□□ -0.97
GGA3-223ENST00000621870 GSTM5P46439 218 aa9□□□□□ -0.97
GGA3-223ENST00000621870 PSMD4P55036 377 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 HNRNPKP61978 463 aaKnown RBP eCLIP9□□□□□ -0.97
GGA3-223ENST00000621870 ABHD13Q7L211 337 aa9□□□□□ -0.97
GGA3-223ENST00000621870 NET1Q7Z628 596 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 HIST2H2ABQ8IUE6 130 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TMEM126BQ8IUX1 230 aa9□□□□□ -0.97
GGA3-223ENST00000621870 GLB1L3Q8NCI6 653 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 ZNF671Q8TAW3 534 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SLC5A11Q8WWX8 675 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SLC47A1Q96FL8 570 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TGM7Q96PF1 710 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CIB1Q99828 191 aa9□□□□□ -0.97
GGA3-223ENST00000621870 C17orf62Q9BQA9 187 aa9□□□□□ -0.97
GGA3-223ENST00000621870 HERPUD2Q9BSE4 406 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TBL1XR1Q9BZK7 514 aa9□□□□□ -0.97
GGA3-223ENST00000621870 OR8D2Q9GZM6 311 aa9□□□□□ -0.97
GGA3-223ENST00000621870 ZNF334Q9HCZ1 680 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TBC1D23Q9NUY8 699 aa9□□□□□ -0.97
GGA3-223ENST00000621870 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 DNMT3BQ9UBC3 853 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 LAMB4A4D0S4 1761 aa9□□□□□ -0.97
GGA3-223ENST00000621870 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 GSC2O15499 205 aa9□□□□□ -0.97
GGA3-223ENST00000621870 ITM2AO43736 263 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CDC123O75794 336 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 NCK1P16333 377 aa9□□□□□ -0.97
GGA3-223ENST00000621870 NELFEP18615 380 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 DRD1P21728 446 aa9□□□□□ -0.97
GGA3-223ENST00000621870 AHCYP23526 432 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CTSKP43235 329 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SPINT3P49223 89 aa9□□□□□ -0.97
GGA3-223ENST00000621870 AGTR2P50052 363 aa9□□□□□ -0.97
GGA3-223ENST00000621870 GPR68Q15743 365 aa9□□□□□ -0.97
GGA3-223ENST00000621870 FAM214AQ32MH5 1076 aa9□□□□□ -0.97
GGA3-223ENST00000621870 MTX3Q5HYI7 312 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TMEM240Q5SV17 173 aa9□□□□□ -0.97
GGA3-223ENST00000621870 RTN4RL1Q86UN2 441 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TMC8Q8IU68 726 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TICAM1Q8IUC6 712 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CLVS1Q8IUQ0 354 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TRPV3Q8NET8 790 aa9□□□□□ -0.97
GGA3-223ENST00000621870 OR2T3Q8NH03 318 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SLC38A4Q969I6 547 aa9□□□□□ -0.97
GGA3-223ENST00000621870 COL21A1Q96P44 957 aa9□□□□□ -0.97
GGA3-223ENST00000621870 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TRIM39Q9HCM9 518 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CLN6Q9NWW5 311 aa9□□□□□ -0.97
GGA3-223ENST00000621870 ZSCAN32Q9NX65 697 aa9□□□□□ -0.97
GGA3-223ENST00000621870 RNF11Q9Y3C5 154 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CAPN8A6NHC0 703 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TNFAIP8O95379 198 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CBSLP0DN79 551 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CD247P20963 164 aa9□□□□□ -0.97
GGA3-223ENST00000621870 MAOBP27338 520 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CBSP35520 551 aa9□□□□□ -0.97
GGA3-223ENST00000621870 ST13P50502 369 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 VSX2P58304 361 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 RPS13P62277 151 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 DSC3Q14574 896 aa9□□□□□ -0.97
GGA3-223ENST00000621870 ADRM1Q16186 407 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms