RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR10A4Q9H209 315 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZDHHC6Q9H6R6 413 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CHST7Q9NS84 486 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ARMC1Q9NVT9 282 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF490Q9ULM2 529 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TIMM13Q9Y5L4 95 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ATP6V1G2-DDX39BF2Z307 99 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SLC35G4P0C7Q5 338 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CYP3A5P20815 502 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GSTM2P28161 218 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 VEGFCP49767 419 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 DEFA6Q01524 100 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF627Q7L945 461 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF367Q7RTV3 350 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PIGWQ7Z7B1 504 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 HID1Q8IV36 788 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SKA3Q8IX90 412 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR5T2Q8NGG2 359 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR10G6Q8NH81 332 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 FNDC8Q8TC99 324 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TRUB1Q8WWH5 349 aaKnown RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SCRN2Q96FV2 425 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF649Q9BS31 505 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MTG2Q9H4K7 406 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GPATCH2Q9NW75 528 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SAGE1Q9NXZ1 904 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MALT1Q9UDY8 824 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 H0YAE9 185 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ARPC2O15144 300 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 INSRRP14616 1297 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PCDH1Q08174 1060 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PON2Q15165 354 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CTC1Q2NKJ3 1217 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C10orf62Q5T681 223 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CATSPERGQ6ZRH7 1159 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZFPM1Q8IX07 1006 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 STON2Q8WXE9 905 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GAD1Q99259 594 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR51E2Q9H255 320 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PPA2Q9H2U2 334 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 FAM83DQ9H4H8 585 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SGK2Q9HBY8 427 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 POMPQ9Y244 141 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PRKAB1Q9Y478 270 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TEX51A0A1B0GUA7 166 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SH3PXD2BA1X283 911 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR6C6A6NF89 314 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MT-CO2P00403 227 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SPATA31D3P0C874 917 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SEMA3AQ14563 771 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TLR1Q15399 786 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 NADK2Q4G0N4 442 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C9orf64Q5T6V5 341 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OGFOD2Q6N063 350 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C3orf33Q6P1S2 294 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SPATA31D4Q6ZUB0 917 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SULT4A1Q9BR01 284 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 DUSP16Q9BY84 665 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OSBPL7Q9BZF2 842 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 A0A075B6Q4 140 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 hCG_1818297A0A087WSY0 165 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3DA0A087WVF3 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3IA0A087WXS9 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3EA0A087X179 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3KA0A087X1G2 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3FA6NER0 549 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3LB9A6J9 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 LRRTM2O43300 516 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 RCBTB2O95199 551 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 LATS1O95835 1130 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3HP0C7X1 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 RBMXP38159 391 aaKnown RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SSR2P43308 183 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CXCR3P49682 368 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PER3P56645 1201 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 HERV-K104P61576 105 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 DUSP4Q13115 394 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 BATFQ16520 125 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3GQ6DHY5 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3CQ6IPX1 549 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF529Q6P280 563 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 USP49Q70CQ1 688 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TBC1D3Q8IZP1 549 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 BEST4Q8NFU0 473 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR4C15Q8NGM1 316 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MAELQ96JY0 434 aaKnown RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TREX2Q9BQ50 279 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TKTL2Q9H0I9 626 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 COQ10BQ9H8M1 238 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 CHRAC1Q9NRG0 131 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SLC7A8Q9UHI5 535 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ACSL5Q9ULC5 683 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ERVK-19Q9WJR5 959 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ASB4Q9Y574 426 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SPIN1Q9Y657 262 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MYH11P35749 1972 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C5orf60A6NFR6 353 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 INMT-MINDY4F8WBC2 141 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms