RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TSTA3Q13630 321 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 FASTKQ14296 549 aaKnown RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 C4orf17Q53FE4 359 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 ATP1A1-AS1Q5TC04 95 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 DUPD1Q68J44 220 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 UGT3A1Q6NUS8 523 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 FAM199XQ6PEV8 388 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 SLC38A9Q8NBW4 561 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 HMGCLL1Q8TB92 370 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 MR1Q95460 341 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 RUFY1Q96T51 708 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 MIPEPQ99797 713 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 CHRNA10Q9GZZ6 450 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 GEMIN8Q9NWZ8 242 aaKnown RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 TAS2R13Q9NYV9 303 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 SERTAD3Q9UJW9 196 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 EIF3FO00303 357 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 NKX2-8O15522 239 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF749O43361 778 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 ERGP11308 486 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 SFTPCP11686 197 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 GABRA4P48169 554 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 RGS4P49798 205 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 TIAL1Q01085 375 aaKnown RBP eCLIP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 MC1RQ01726 317 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 MGAT5Q09328 741 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 PDAP1Q13442 181 aaKnown RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 FRG1Q14331 258 aaKnown RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 CYP2A13Q16696 494 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 LRRC8EQ6NSJ5 796 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 C8orf74Q6P047 294 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 C16orf46Q6P387 395 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 UBE2R2Q712K3 238 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 SYTL1Q8IYJ3 562 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 LRFN5Q96NI6 719 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 PKP4Q99569 1192 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 ACAT2Q9BWD1 397 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 AKIRIN1Q9H9L7 192 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 PCMTD2Q9NV79 361 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 KCND3Q9UK17 655 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 CORO1CQ9ULV4 474 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-228ENST00000618469 MAN2B2Q9Y2E5 1009 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 PSAT1Q9Y617 370 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 SPTBP11277 2137 aa15.37■□□□□ 0.05
BRCA1-228ENST00000618469 A0A1W2PPV9 198 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 C21orf140B9A014 251 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 EIF3HO15372 352 aaKnown RBP eCLIP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ZSCAN9O15535 394 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PRICKLE3O43900 615 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FKBP9O95302 570 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 SLC16A8O95907 504 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 KLK3P07288 261 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 CTSBP07858 339 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 RORAP35398 523 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PLTPP55058 493 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 WHAMMP3Q1A5X7 153 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PTCHD3Q3KNS1 767 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 HECTD2Q5U5R9 776 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FCRL6Q6DN72 434 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FAM45BPQ6NSW5 357 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FIGLAQ6QHK4 219 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PAQR3Q6TCH7 311 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 SUSD1Q6UWL2 747 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 DSELQ8IZU8 1212 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 MYO1HQ8N1T3 1032 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 DNAJC22Q8N4W6 341 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FBXO15Q8NCQ5 510 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PPFIBP2Q8ND30 876 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 OR2L3Q8NG85 312 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 FAM45AQ8TCE6 357 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PYROXD1Q8WU10 500 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 EEF1AKMT1Q8WVE0 214 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ASB11Q8WXH4 323 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 SMPDL3AQ92484 453 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 LINGO1Q96FE5 620 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 OLFM1Q99784 485 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 CHST8Q9H2A9 424 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ACTL8Q9H568 366 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF71Q9NQZ8 489 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ABCF3Q9NUQ8 709 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PLCL2Q9UPR0 1127 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 PCDHGA6Q9Y5G7 932 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 NBPF19A0A087WUL8 3843 aa15.36■□□□□ 0.05
BRCA1-228ENST00000618469 ESYT3A0FGR9 886 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 BLACEA4D250 179 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF839A8K0R7 811 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 GFYI3L273 518 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 MEN1O00255 615 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 ZBTB14O43829 449 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 NRP2O60462 931 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 FDXRP22570 491 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 RPA3P35244 121 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-228ENST00000618469 GRIA3P42263 894 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 SKIV2L2P42285 1042 aaKnown RBP15.35■□□□□ 0.05
BRCA1-228ENST00000618469 PGGT1BP53609 377 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 PNLIPRP1P54315 467 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 RPS18P62269 152 aaKnown RBP15.35■□□□□ 0.05
BRCA1-228ENST00000618469 SP140Q13342 867 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms