RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ACAD10Q6JQN1 1059 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC25A25Q6KCM7 469 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 FDX2Q6P4F2 183 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 B3GNT6Q6ZMB0 384 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 BRAPQ7Z569 592 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC13A5Q86YT5 568 aaPredicted RBP6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 TRAPPC5Q8IUR0 188 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 IQUBQ8NA54 791 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 TMEM178AQ8NBL3 297 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC22A8Q8TCC7 542 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 STT3BQ8TCJ2 826 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 PHF3Q92576 2039 aaKnown RBP6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC35C1Q96A29 364 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 VPS50Q96JG6 964 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 PSKH2Q96QS6 385 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 WWP1Q9H0M0 922 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 FAM83DQ9H4H8 585 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 A0A0J9YYE9 177 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 MEGF11A6BM72 1044 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 CES2O00748 559 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 POLR2DO15514 142 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 FZD6O60353 706 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 PRMT3O60678 531 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 CDK14O94921 469 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 MATN4O95460 622 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 TRBC1P01850 177 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 ZGLP1P0C6A0 271 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 PIM1P11309 404 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 SPINT3P49223 89 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 ASCL1P50553 236 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 OC90Q02509 493 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 ACKR1Q16570 336 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 ZNF569Q5MCW4 686 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 TLDC1Q6P9B6 456 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 STRADAQ7RTN6 431 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 NLRP9Q7RTR0 991 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 CRLF3Q8IUI8 442 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 SMYD4Q8IYR2 804 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 FAM98AQ8NCA5 519 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 NAXEQ8NCW5 288 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 NAT14Q8WUY8 206 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 EID2BQ96D98 161 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 ZSCAN31Q96LW9 406 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 C12orf66Q96MD2 445 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 OLFM1Q99784 485 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 PLCD4Q9BRC7 762 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 UTP23Q9BRU9 249 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 SPATA16Q9BXB7 569 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 DEFB127Q9H1M4 99 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 XKR8Q9H6D3 395 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 C6orf203Q9P0P8 240 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 TMEM59LQ9UK28 342 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 NXT1Q9UKK6 140 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 TMPRSS11EQ9UL52 423 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 MPDZO75970 2070 aa6.45□□□□□ -1.38
SCAMP1-206ENST00000618166 IGHV3-20A0A0C4DH32 117 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 A0A1W2PQ72 361 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 BECN2A8MW95 431 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 BIN1O00499 593 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 NME2P1O60361 137 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 SLC25A12O75746 678 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 MT-CYBP00156 380 aaPredicted RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 EPB41P11171 864 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 ITGA2P17301 1181 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 SRD5A1P18405 259 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 NME2P22392 152 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 RPL13P26373 211 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 PBLDP30039 288 aaPredicted RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 PRKCIP41743 596 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 FMO5P49326 533 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 CARSP49589 748 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 WNT3P56703 355 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 GCNT1Q02742 428 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 HYAL2Q12891 473 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 CLEC12BQ2HXU8 276 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 HYAL4Q2M3T9 481 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 ARHGAP11AQ6P4F7 1023 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 KDELC1Q6UW63 502 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 ZNF227Q86WZ6 799 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 ARHGAP12Q8IWW6 846 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 DNAJC22Q8N4W6 341 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 C3orf56Q8N813 242 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 GPR26Q8NDV2 337 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 GPT2Q8TD30 523 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 GLYATL1Q969I3 302 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 MIEF2Q96C03 454 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 IMMP1LQ96LU5 166 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 NUDCD1Q96RS6 583 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 USP28Q96RU2 1077 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 NAA15Q9BXJ9 866 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 SRMSQ9H3Y6 488 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 UPF2Q9HAU5 1272 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 ACTR10Q9NZ32 417 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 STOX2Q9P2F5 926 aaPredicted RBP6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 FAM8A1Q9UBU6 413 aa6.44□□□□□ -1.38
SCAMP1-206ENST00000618166 TEKT2Q9UIF3 430 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms