RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 DAPP51397 102 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 B4GALNT1Q00973 533 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 CTF1Q16619 201 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 PTCHD3Q3KNS1 767 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 GPR33Q49SQ1 333 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 LRRC73Q5JTD7 316 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 CRTC1Q6UUV9 634 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 TRIM74Q86UV6 250 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 PIK3C3Q8NEB9 887 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 ENPP5Q9UJA9 477 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 SNX6Q9UNH7 406 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 SLC22A14Q9Y267 594 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 AP3M1Q9Y2T2 418 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 CPQQ9Y646 472 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 TET1Q8NFU7 2136 aa11.48□□□□□ -0.57
C11orf54-215ENST00000617482 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PRRG1O14668 218 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 WNT9AO14904 365 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ZSCAN9O15535 394 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 GREM1O60565 184 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ZNF821O75541 412 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SULT1C4O75897 302 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ITIH1P19827 911 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 IDUAP35475 653 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 TM4SF4P48230 202 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ABHD18Q0P651 414 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 EGFLAMQ63HQ2 1017 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 LRRC66Q68CR7 880 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 NEK5Q6P3R8 708 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SHQ1Q6PI26 577 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 CCDC81Q6ZN84 652 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 RNF165Q6ZSG1 346 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 FKBP9P1Q75LS8 142 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 VTCN1Q7Z7D3 282 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 B3GNT8Q7Z7M8 397 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 VRK3Q8IV63 474 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 OR7A2PQ8NGA2 310 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SCLYQ96I15 445 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 MRPL9Q9BYD2 267 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 TRIT1Q9H3H1 467 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 THG1LQ9NWX6 298 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 MAN2B2Q9Y2E5 1009 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SH3GLB1Q9Y371 365 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PRAMEF4O60810 478 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PRPS2P11908 318 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 EFNA1P20827 205 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 EPHA2P29317 976 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 DGCR6Q14129 220 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SF1Q15637 639 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 NPTX1Q15818 432 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PRAMEF9Q5VWM5 478 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 LAIR1Q6GTX8 287 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ZNF621Q6ZSS3 439 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ANKRD13BQ86YJ7 626 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 CRIPAKQ8N1N5 446 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SLC43A3Q8NBI5 491 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 CDC26Q8NHZ8 85 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PANX1Q96RD7 426 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 COPS8Q99627 209 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 DPH2Q9BQC3 489 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-215ENST00000617482 ATG10Q9H0Y0 220 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 FAM8A1Q9UBU6 413 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 BACE2Q9Y5Z0 518 aa11.47□□□□□ -0.57
C11orf54-215ENST00000617482 PIKFYVEQ9Y2I7 2098 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CLIC1O00299 241 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 UGT2B11O75310 529 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 PEX14O75381 377 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 MTX2O75431 263 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 ABLIM3O94929 683 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CCNDBP1O95273 360 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 FKBP9O95302 570 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
C11orf54-215ENST00000617482 HIST1H2AGP0C0S8 130 aaPredicted RBP11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CCDC159P0C7I6 412 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 HOXB9P17482 250 aaPredicted RBP11.46□□□□□ -0.57
C11orf54-215ENST00000617482 ENGP17813 658 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 HIST1H2ADP20671 130 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CD70P32970 193 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 HALP42357 657 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
C11orf54-215ENST00000617482 KIR3DL1P43629 444 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 CLK3P49761 638 aaKnown RBP11.46□□□□□ -0.57
C11orf54-215ENST00000617482 PTSQ03393 145 aa11.46□□□□□ -0.57
C11orf54-215ENST00000617482 RELAQ04206 551 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms