RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LDB2O43679 373 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 KLF7O75840 302 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 WNT3AP56704 352 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 GPX6P59796 221 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 OLIG2Q13516 323 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 TMED2Q15363 201 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 KHDC1Q4VXA5 237 aaKnown RBP16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 NLRP9Q7RTR0 991 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLC26A11Q86WA9 606 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 CTAGE3PQ8IX95 158 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 PARP9Q8IXQ6 854 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLC25A41Q8N5S1 370 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 GPR26Q8NDV2 337 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 RELTQ969Z4 430 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 TLCD1Q96CP7 247 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 MTBPQ96DY7 904 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 IP6K3Q96PC2 410 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 FICDQ9BVA6 458 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 ADGRE3Q9BY15 652 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 PPANQ9NQ55 473 aaKnown RBP16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 ADAM21Q9UKJ8 722 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 PADI2Q9Y2J8 665 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF711Q9Y462 761 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 PIKFYVEQ9Y2I7 2098 aa16.99■□□□□ 0.31
TRAPPC3-209ENST00000616395 TCRBV9S1A1TA0A576 114 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 C9J4A7 227 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 PEX12O00623 359 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 AURKAO14965 403 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 VEGFDO43915 354 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 BANF1O75531 89 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 USP1O94782 785 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 CDK14O94921 469 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 EPOP01588 193 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 HLA-DPA1P20036 260 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 CYP2A7P20853 494 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 HTR1EP28566 365 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 TSFMP43897 325 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 FRG1Q14331 258 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 SPARCL1Q14515 664 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 SSPNQ14714 243 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 RPE65Q16518 533 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF789Q5FWF6 425 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 UNC5AQ6ZN44 842 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF534Q76KX8 674 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 C11orf96Q7Z7L8 435 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF295-AS1Q8N0V1 137 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 OR1L3Q8NH93 324 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 MRGPRX2Q96LB1 330 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 SMC6Q96SB8 1091 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZSCAN5AQ9BUG6 496 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 FANCEQ9HB96 536 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 CHST11Q9NPF2 352 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF180Q9UJW8 692 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 BTRCQ9Y297 605 aa16.98■□□□□ 0.31
TRAPPC3-209ENST00000616395 NDST3O95803 873 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 IGHEP01854 428 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 BPIP17213 487 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 VCLP18206 1134 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 HADHAP40939 763 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ARCN1P48444 511 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 KPNA2P52292 529 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 SOX8P57073 446 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 MGAT5Q09328 741 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 CDC16Q13042 620 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZNF630Q2M218 657 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 SIRPB2Q5JXA9 342 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 STEAP4Q687X5 459 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ADGRD1Q6QNK2 874 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 OOSP2Q86WS3 158 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 PPP4R1Q8TF05 950 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ALKBH8Q96BT7 664 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZBTB9Q96C00 473 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 PAFAH2Q99487 392 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLX1AQ9BQ83 275 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 SELENOSQ9BQE4 189 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 DHRS4Q9BTZ2 278 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ARNT2Q9HBZ2 717 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 MRM3Q9HC36 420 aaKnown RBP16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 P4HTMQ9NXG6 502 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 NKIRAS1Q9NYS0 192 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZFATQ9P243 1243 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 TBK1Q9UHD2 729 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 SOX13Q9UN79 622 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 PSMD13Q9UNM6 376 aa16.97■□□□□ 0.31
TRAPPC3-209ENST00000616395 OR6C74A6NCV1 312 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 TMEM150CB9EJG8 249 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 ADRA1DP25100 572 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 KRTAP10-9P60411 292 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 CRYMQ14894 314 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 VWA2Q5GFL6 755 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 PDPK2PQ6A1A2 396 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 ARMC6Q6NXE6 501 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 TRAPPC5Q8IUR0 188 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 CARFQ8N187 725 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 TRAM1L1Q8N609 369 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 PPM1NQ8N819 430 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 DNAJB14Q8TBM8 379 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms