RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CXorf21	Q9HAI6	301 aa		13.52	□□□□□ -0.24
CACNA1C-231	ENST00000616390	IFT80	Q9P2H3	777 aa	Predicted RBP	13.52	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SERPINA1	P01009	418 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	IL6	P05231	212 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C1S	P09871	688 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MSH3	P20585	1137 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MAPK8	P45983	427 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KCTD21	Q4G0X4	260 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ANKRD26P1	Q6NSI1	321 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	BORA	Q6PGQ7	559 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM26	Q6ZUK4	368 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	OR8J3	Q8NGG0	315 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MTERF1	Q99551	399 aa	Known RBP	13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	UGT2B28	Q9BY64	529 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TOR3A	Q9H497	397 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CLMP	Q9H6B4	373 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TRPS1	Q9UHF7	1281 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMPRSS11E	Q9UL52	423 aa		13.52	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM202	A6NGA9	273 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390		H0Y858	1186 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HS6ST1	O60243	411 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF682	O95780	498 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	THRB	P10828	461 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DAG1	Q14118	895 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RAB39A	Q14964	217 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	OR4F3	Q6IEY1	312 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390		Q6ZVL8	140 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TRIM46	Q7Z4K8	759 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NECAB2	Q7Z6G3	386 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MED8	Q96G25	268 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ITCH	Q96J02	903 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	WDR70	Q9NW82	654 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SLC25A13	Q9UJS0	675 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DENND4C	Q5VZ89	1909 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TULP3	O75386	442 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RFPL2	O75678	378 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CXCL14	O95715	111 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ITGB8	P26012	769 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PBLD	P30039	288 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	POLR2I	P36954	125 aa	Known RBP	13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ETV3	P41162	512 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ALDH3A2	P51648	485 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CARD16	Q5EG05	197 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DOK6	Q6PKX4	331 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LMNTD1	Q8N9Z9	388 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CD320	Q9NPF0	282 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	VPS4A	Q9UN37	437 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SH3GLB1	Q9Y371	365 aa		13.51	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CREG1	O75629	220 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FGF18	O76093	207 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DIRAS1	O95057	198 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CPSF4	O95639	269 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ATP1B2	P14415	290 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SPINT3	P49223	89 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ADARB1	P78563	741 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CHIT1	Q13231	466 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SLC14A1	Q13336	389 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PON2	Q15165	354 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZBED5	Q49AG3	693 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RUNDC3A	Q59EK9	446 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM179B	Q7Z7N9	219 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ERI1	Q8IV48	349 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	USP7	Q93009	1102 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	VOPP1	Q96AW1	172 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF689	Q96CS4	500 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PPT2	Q9UMR5	302 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZBBX	A8MT70	800 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PRAMEF4	O60810	478 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ALPL	P05186	524 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCL5	P13501	91 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LAG3	P18627	525 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NR4A1	P22736	598 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AOAH	P28039	575 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GALK1	P51570	392 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MEP1A	Q16819	746 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PRAMEF9	Q5VWM5	478 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GALNT5	Q7Z7M9	940 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMC8	Q8IU68	726 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ELMOD1	Q8N336	334 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CBARP	Q8N350	705 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	OR7A2P	Q8NGA2	310 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RDH14	Q9HBH5	336 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SNX6	Q9UNH7	406 aa		13.5	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ATE1	O95260	518 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	POP4	O95707	220 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PIGA	P37287	484 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RECQL	P46063	649 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GSTM4	Q03013	218 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GTF2H3	Q13889	308 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ADNP2	Q6IQ32	1131 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CES5A	Q6NT32	575 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CYP2U1	Q7Z449	544 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HSD11B1L	Q7Z5J1	315 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FAM217A	Q8IXS0	508 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MICU2	Q8IYU8	434 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KREMEN2	Q8NCW0	462 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PAIP1	Q9H074	479 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms