RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 PPM1FP49593 454 aaPredicted RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 PDX1P52945 283 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 SQSTM1Q13501 440 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCL4-201ENST00000613947 PLCL1Q15111 1095 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 HECTD2Q5U5R9 776 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 ZNF574Q6ZN55 896 aaPredicted RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 B3GNT8Q7Z7M8 397 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 PIM3Q86V86 326 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 MCUR1Q96AQ8 359 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 MVB12BQ9H7P6 319 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 TAS2R13Q9NYV9 303 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 CIDEBQ9UHD4 219 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 ACACAQ13085 2346 aa12.47□□□□□ -0.41
CCL4-201ENST00000613947 COL27A1Q8IZC6 1860 aaPredicted RBP12.47□□□□□ -0.41
CCL4-201ENST00000613947 APC2O95996 2303 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 HGSO14964 777 aaPredicted RBP12.46□□□□□ -0.41
CCL4-201ENST00000613947 DUX1O43812 170 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 FAM155BO75949 473 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 KRT36O76013 467 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 PROS1P07225 676 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 AMD1P17707 334 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 MPSTP25325 297 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 PHBP35232 272 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 SERPINB4P48594 390 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 ISXQ2M1V0 245 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 KLHL38Q2WGJ6 581 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 LIN52Q52LA3 116 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 OR4E2Q8NGC2 313 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 RSC1A1Q92681 617 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 VPS39Q96JC1 886 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 OLFM1Q99784 485 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 CPNE1Q99829 537 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 HGH1Q9BTY7 390 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
CCL4-201ENST00000613947 SEMA6CQ9H3T2 930 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TMEM9Q9P0T7 183 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TXNDC16Q9P2K2 825 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 TRMT6Q9UJA5 497 aaKnown RBP12.46□□□□□ -0.41
CCL4-201ENST00000613947 GRID1Q9ULK0 1009 aa12.46□□□□□ -0.41
CCL4-201ENST00000613947 FAM95CA0A1B0GW59 222 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 FAM221BA6H8Z2 402 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 EIF4E1BA6NMX2 242 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 FOXO6A8MYZ6 492 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CSO75390 466 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 SPAG7O75391 227 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 PABPC4LP0CB38 370 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 KRT15P19012 456 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 SAT1P21673 171 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CD9P21926 228 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 FDXRP22570 491 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 GP5P40197 560 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 TRMT5Q32P41 509 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 UGT3A1Q6NUS8 523 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 AAGABQ6PD74 315 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 PAQR3Q6TCH7 311 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CYHR1Q6ZMK1 362 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CPNE9Q8IYJ1 553 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CACTIN-AS1Q8N1I8 211 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 OR52E1Q8NGJ3 308 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 LCN9Q8WX39 176 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 AHCTF1Q8WYP5 2266 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 PPP1R14BQ96C90 147 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 DEPDC7Q96QD5 511 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 CYTH2Q99418 400 aa12.46□□□□□ -0.42
CCL4-201ENST00000613947 TDRKHQ9Y2W6 561 aaKnown RBP12.46□□□□□ -0.42
CCL4-201ENST00000613947 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
CCL4-201ENST00000613947 ANKRD12Q6UB98 2062 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 DMXL2Q8TDJ6 3036 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 FKBP6O75344 327 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 MATN4O95460 622 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 MAGEA8P43361 318 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 CAPZBP47756 277 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 ARFIP2P53365 341 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 TAS2R39P59534 338 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 ZFP36L1Q07352 338 aaKnown RBP12.45□□□□□ -0.42
CCL4-201ENST00000613947 CLPPQ16740 277 aaPredicted RBP12.45□□□□□ -0.42
CCL4-201ENST00000613947 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 TMEM71Q6P5X7 295 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 UNC5DQ6UXZ4 953 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 SLITRK4Q8IW52 837 aa12.45□□□□□ -0.42
CCL4-201ENST00000613947 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms