RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 MUS81Q96NY9 551 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 SSX3Q99909 188 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 BRD9Q9H8M2 597 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 TRPV4Q9HBA0 871 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 TIGARQ9NQ88 270 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 ENAMQ9NRM1 1142 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF214Q9UL59 606 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-211ENST00000613795 DUSP11O75319 330 aaKnown RBP6.73□□□□□ -1.33
CLCN3-211ENST00000613795 CILPO75339 1184 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 CDH5P33151 784 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-211ENST00000613795 CDKN2CP42773 168 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 AP1S1P61966 158 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 BIKQ13323 160 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF697Q5TEC3 545 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 SLC24A5Q71RS6 500 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 COMMD2Q86X83 199 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 MARCH9Q86YJ5 346 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 PHTF2Q8N3S3 785 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 ADAM32Q8TC27 787 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 ART5Q96L15 291 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 SCGB3A2Q96PL1 93 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 SNX18Q96RF0 628 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 COPS8Q99627 209 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 RAB11FIP5Q9BXF6 653 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 MAGEH1Q9H213 219 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 GBA3Q9H227 469 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 TM9SF3Q9HD45 589 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 CALML5Q9NZT1 146 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 SRRDQ9UH36 339 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 CDC14AQ9UNH5 594 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 POLR1DQ9Y2S0 133 aa6.73□□□□□ -1.33
CLCN3-211ENST00000613795 hCG_2039718K7EN88 272 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PAPSS2O95340 614 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TRBC1P01850 177 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 COL6A1P12109 1028 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ELK4P28324 431 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RYKP34925 604 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CD79BP40259 229 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GSTM4Q03013 218 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SLC3A1Q07837 685 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ABRQ12979 859 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TUBB3Q13509 450 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CBX2Q14781 532 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 HES5Q5TA89 166 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF782Q6ZMW2 699 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 DENND1CQ8IV53 801 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LINC00471Q8N535 108 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LINGO1Q96FE5 620 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TMEM80Q96HE8 168 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 C12orf42Q96LP6 360 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CEP295NLQ96MC4 621 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 AIF1LQ9BQI0 150 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GPR88Q9GZN0 384 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF304Q9HCX3 659 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PHPT1Q9NRX4 125 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF490Q9ULM2 529 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ERVW-1Q9UQF0 538 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LRRN3E7EW58 273 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TLR4O00206 839 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SLC28A2O43868 658 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ATG13O75143 517 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ENDOD1O94919 500 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 IFNA17P01571 189 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CSF2P04141 144 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 BMP2P12643 396 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 NAT1P18440 290 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GPX6P59796 221 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 FGL1Q08830 312 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CCDC58Q4VC31 144 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TMEM192Q8IY95 271 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 KIAA0319LQ8IZA0 1049 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 DAW1Q8N136 415 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF433Q8N7K0 673 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF675Q8TD23 568 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 NRG4Q8WWG1 115 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PGLYRP2Q96PD5 576 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TMEM209Q96SK2 561 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LGMNQ99538 433 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MRPL45Q9BRJ2 306 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ASPNQ9BXN1 380 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LRRN3Q9H3W5 708 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 C11orf16Q9NQ32 467 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MAT2BQ9NZL9 334 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TMEM98Q9Y2Y6 226 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PRKYO43930 277 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GATBO75879 557 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 FGBP02675 491 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 C4BPAP04003 597 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RBBP4Q09028 425 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SLC13A2Q13183 592 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SNTA1Q13424 505 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SEMA5AQ13591 1074 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 HEPACAMQ14CZ8 416 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GPAT3Q53EU6 434 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms