RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 LMNTD1Q8N9Z9 388 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 WDR48Q8TAF3 677 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 MDM1Q8TC05 714 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 PPP4R1Q8TF05 950 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 L3HYPDHQ96EM0 354 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ZDHHC12Q96GR4 267 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 DPYSL5Q9BPU6 564 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 C1QTNF3Q9BXJ4 246 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 TWSG1Q9GZX9 223 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ZMYND15Q9H091 742 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ABCG4Q9H172 646 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 LRRN3Q9H3W5 708 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 MLXIPLQ9NP71 852 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ABCF3Q9NUQ8 709 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 DNAJC11Q9NVH1 559 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ACTR10Q9NZ32 417 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 OGFRQ9NZT2 677 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 EPHA6Q9UF33 1036 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ANGPTL3Q9Y5C1 460 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 KCNE2Q9Y6J6 123 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 WDR87Q6ZQQ6 2873 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 A0A1W2PPV9 198 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 WDR91A4D1P6 747 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 PRICKLE3O43900 615 aaPredicted RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 KATNA1O75449 491 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 SUPT7LO94864 414 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 FKBP9O95302 570 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 RPLP0P05388 317 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 CHN1P15882 459 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 EPB42P16452 691 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 NPPBP16860 134 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 CSRP1P21291 193 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 ACADVLP49748 655 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 NAGLUP54802 743 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 CCL7P80098 99 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 ABATP80404 500 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 E2F1Q01094 437 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 CFAP157Q5JU67 520 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 NKAIN2Q5VXU1 208 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 WDR74Q6RFH5 385 aaPredicted RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 USP53Q70EK8 1073 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 GLRX5Q86SX6 157 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 OR2A1Q8NGT9 310 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 PPP1R14CQ8TAE6 165 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 MECRQ9BV79 373 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 INTS9Q9NV88 658 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 TAC3Q9UHF0 121 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 DYRK1BQ9Y463 629 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 E2F3O00716 465 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 CAPN5O15484 640 aaPredicted RBP14.19□□□□□ -0.14
CD48-203ENST00000613788 H2AFYO75367 372 aaKnown RBP14.19□□□□□ -0.14
CD48-203ENST00000613788 CPNE6O95741 557 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 UGT2B7P16662 529 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 GNAZP19086 355 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 PRDX3P30048 256 aaKnown RBP14.19□□□□□ -0.14
CD48-203ENST00000613788 CMPK1P30085 196 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 PRDX1Q06830 199 aaKnown RBP14.19□□□□□ -0.14
CD48-203ENST00000613788 CDC16Q13042 620 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 PDK4Q16654 411 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 SLC5A12Q1EHB4 618 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 IRGCQ6NXR0 463 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 SPESP1Q6UW49 350 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 C17orf64Q86WR6 236 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 TRIM42Q8IWZ5 723 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 TEX9Q8N6V9 391 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 SNX31Q8N9S9 440 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 DEFB124Q8NES8 71 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 FAM76AQ8TAV0 307 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 DYDC1Q8WWB3 177 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 TMEM237Q96Q45 408 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 OR2A14Q96R47 310 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 CD180Q99467 661 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 ACAT2Q9BWD1 397 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 GPRC5BQ9NZH0 403 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 PCDHGA1Q9Y5H4 931 aa14.19□□□□□ -0.14
CD48-203ENST00000613788 ASCC3Q8N3C0 2202 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 A0A1W2PQM1 296 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 LRRC14BA6NHZ5 514 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 SLC30A4O14863 429 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 RPS17P08708 135 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 CDK4P11802 303 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 SDHBP21912 280 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 HRH2P25021 359 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 PEBP1P30086 187 aaKnown RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 ATP1A2P50993 1020 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 GTF2H2Q13888 395 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 NAA25Q14CX7 972 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 UNC50Q53HI1 259 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 ICE2Q659A1 982 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 GTF2H2CQ6P1K8 395 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 TMEM71Q6P5X7 295 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 OR2L3Q8NG85 312 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 ZNF483Q8TF39 744 aaPredicted RBP14.18□□□□□ -0.14
CD48-203ENST00000613788 CNDP1Q96KN2 507 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 TGM7Q96PF1 710 aa14.18□□□□□ -0.14
CD48-203ENST00000613788 OR4K3Q96R72 315 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms