RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	SLC39A10	Q9ULF5	831 aa		10.66	□□□□□ -0.7
CBWD1-222	ENST00000613508	DRG1	Q9Y295	367 aa	Known RBP	10.66	□□□□□ -0.7
CBWD1-222	ENST00000613508	ZKSCAN5	Q9Y2L8	839 aa		10.66	□□□□□ -0.7
CBWD1-222	ENST00000613508	COPG1	Q9Y678	874 aa	Known RBP	10.66	□□□□□ -0.7
CBWD1-222	ENST00000613508	NUP210L	Q5VU65	1888 aa		10.66	□□□□□ -0.7
CBWD1-222	ENST00000613508	ANKUB1	A6NFN9	424 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	MATN4	O95460	622 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	ERG	P11308	486 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	ETS1	P14921	441 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	ARNT	P27540	789 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	RPL22	P35268	128 aa	Known RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	NPY2R	P49146	381 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	EMP3	P54852	163 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	ADAR	P55265	1226 aa	Known RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CDK16	Q00536	496 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	NAA25	Q14CX7	972 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	TYSND1	Q2T9J0	566 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	AGAP7P	Q5VUJ5	663 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	PRMT9	Q6P2P2	845 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	OTOA	Q7RTW8	1153 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	LDB1	Q86U70	411 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	RAB42	Q8N4Z0	105 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	C2orf73	Q8N5S3	287 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	TTC29	Q8NA56	475 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	OR2L3	Q8NG85	312 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	OR2A1	Q8NGT9	310 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CFAP61	Q8NHU2	1237 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	GSDMB	Q8TAX9	411 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	MAGEC3	Q8TD91	643 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	BIRC8	Q96P09	236 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	AGAP4	Q96P64	663 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	TCF12	Q99081	682 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	KIFC1	Q9BW19	673 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	MAP10	Q9P2G4	905 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CTSF	Q9UBX1	484 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CDC23	Q9UJX2	597 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	SLC5A6	Q9Y289	635 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	NTNG1	Q9Y2I2	539 aa		10.65	□□□□□ -0.7
CBWD1-222	ENST00000613508	CCDC88C	Q9P219	2028 aa		10.65	□□□□□ -0.71
CBWD1-222	ENST00000613508	IGLV3-12	A0A075B6K2	115 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508		A0A1W2PPV9	198 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508		A0A1W2PQ72	361 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	HYKK	A2RU49	373 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	OR2A25	A4D2G3	310 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508		H3BMM5	538 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	MASP2	O00187	686 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	PHF2	O75151	1096 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	NDUFS3	O75489	264 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	MCM3	P25205	808 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	ITGA3	P26006	1051 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	TSFM	P43897	325 aa	Known RBP	10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	CRADD	P78560	199 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	RELA	Q04206	551 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	SNX1	Q13596	522 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	TUBB8	Q3ZCM7	444 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	CTSL3P	Q5NE16	218 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	WASHC2D	Q5SRD0	308 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	RNF187	Q5TA31	235 aa	Predicted RBP	10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	MEI1	Q5TIA1	1274 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	HIST2H2BC	Q6DN03	193 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	MRNIP	Q6NTE8	343 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	RNF44	Q7L0R7	432 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	PRUNE1	Q86TP1	453 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	TAX1BP1	Q86VP1	789 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	ST6GALNAC3	Q8NDV1	305 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	OR11G2	Q8NGC1	345 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	LPGAT1	Q92604	370 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	FOPNL	Q96NB1	174 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	LHPP	Q9H008	270 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	AGPAT4	Q9NRZ5	378 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	SPATA7	Q9P0W8	599 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	CIDEB	Q9UHD4	219 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	NOVA2	Q9UNW9	492 aa	Known RBP	10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	NFS1	Q9Y697	457 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	FAM169A	Q9Y6X4	670 aa		10.64	□□□□□ -0.71
CBWD1-222	ENST00000613508	ABCA12	Q86UK0	2595 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	MED26	O95402	600 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	CLDN1	O95832	211 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ESR1	P03372	595 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZSCAN5DP	P0CG00	497 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	NMBR	P28336	390 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	MAGEA6	P43360	314 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	CARS	P49589	748 aa	Known RBP	10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	SESN2	P58004	480 aa	Predicted RBP	10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	VSX2	P58304	361 aa	Predicted RBP	10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508		Q0VFX4	171 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ARHGAP19	Q14CB8	494 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	RPS6KA1	Q15418	735 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	PRTG	Q2VWP7	1150 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	CCSMST1	Q4G0I0	132 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	IRAK1BP1	Q5VVH5	260 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ATG9B	Q674R7	924 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	FRMPD2B	Q6IN97	320 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZNF662	Q6ZS27	426 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms