RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 TAP2Q03519 686 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 ZNF542PQ5EBM4 170 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 PDZD3Q86UT5 571 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 GALNT13Q8IUC8 556 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 ATL1Q8WXF7 558 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
TP53-219ENST00000610538 C12orf66Q96MD2 445 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 UHRF1Q96T88 793 aaPredicted RBP11.94□□□□□ -0.5
TP53-219ENST00000610538 FBRSQ9HAH7 460 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 NKX1-2Q9UD57 310 aaPredicted RBP11.94□□□□□ -0.5
TP53-219ENST00000610538 FBXL21Q9UKT6 434 aa11.94□□□□□ -0.5
TP53-219ENST00000610538 PCM1Q15154 2024 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 PDZK1P1A8MUH7 402 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 NRP2O60462 931 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 VPS4BO75351 444 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 RSL1D1O76021 490 aaKnown RBP11.93□□□□□ -0.5
TP53-219ENST00000610538 KRT6AP02538 564 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 KRT6BP04259 564 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 NPPBP16860 134 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 IL12AP29459 219 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SOX11P35716 441 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 KRT6CP48668 564 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 CLCA4Q14CN2 919 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 ARHGAP24Q8N264 748 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 STON2Q8WXE9 905 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 JPH3Q8WXH2 748 aaPredicted RBP11.93□□□□□ -0.5
TP53-219ENST00000610538 FERD3LQ96RJ6 166 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 GPR174Q9BXC1 333 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 XKR8Q9H6D3 395 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SLC2A4RGQ9NR83 387 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 AIG1Q9NVV5 245 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 ADA2Q9NZK5 511 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SLCO1B1Q9Y6L6 691 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 NUP214P35658 2090 aaPredicted RBP11.93□□□□□ -0.5
TP53-219ENST00000610538 KANSL1LA0AUZ9 987 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 LRRC72A6NJI9 287 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 RGS14O43566 566 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SLC22A3O75751 556 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SEMA4FO95754 770 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 C7P10643 843 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 STX5Q13190 355 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 CAPRIN1Q14444 709 aaKnown RBP11.93□□□□□ -0.5
TP53-219ENST00000610538 PYCR3Q53H96 274 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 FRG2Q64ET8 278 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 OGFOD2Q6N063 350 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 TTC23LQ6PF05 361 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SIX5Q8N196 739 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 ZNF740Q8NDX6 193 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 OR56A3Q8NH54 315 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 PROKR1Q8TCW9 393 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SNX19Q92543 992 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 FRG2BQ96QU4 278 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 INSM2Q96T92 566 aaPredicted RBP11.93□□□□□ -0.5
TP53-219ENST00000610538 ITM2CQ9NQX7 267 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 SLAMF8Q9P0V8 285 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
TP53-219ENST00000610538 KCNE1BA0A087WTH5 132 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 FPGTO14772 594 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 MRASO14807 208 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 SLC22A2O15244 555 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PCNAP12004 261 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PSMB5P28074 263 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 DGKQP52824 942 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 TIGD2Q4W5G0 525 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 METTL2BQ6P1Q9 378 aaKnown RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 CYP20A1Q6UW02 462 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 SPATA19Q7Z5L4 167 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 FAM20CQ8IXL6 584 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 OR2T34Q8NGX1 318 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 OR1E3Q8WZA6 343 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 USP7Q93009 1102 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 SLC25A23Q9BV35 468 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 LRTM1Q9HBL6 345 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 POLMQ9NP87 494 aaPredicted RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 SNX6Q9UNH7 406 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 SLC17A4Q9Y2C5 497 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 TDRD6O60522 2096 aaKnown RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 ARHGEF17Q96PE2 2063 aaPredicted RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 COL4A2P08572 1712 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PRSS38A1L453 326 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 KRT36O76013 467 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 EML2O95834 649 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 GNAZP19086 355 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PAX7P23759 505 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 PLOD1Q02809 727 aaPredicted RBP11.92□□□□□ -0.5
TP53-219ENST00000610538 LRP8Q14114 963 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 KRT33BQ14525 404 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 GSTA3Q16772 222 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 LEXMQ3ZCV2 418 aa11.92□□□□□ -0.5
TP53-219ENST00000610538 CAPN13Q6MZZ7 669 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms