RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SUSD6Q92537 303 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 FAM129BQ96TA1 746 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 THUMPD3Q9BV44 507 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 UGT2B28Q9BY64 529 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ANKRD60Q9BZ19 345 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 DPEP2Q9H4A9 486 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RPF2Q9H7B2 306 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SPATA6Q9NWH7 488 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 UBAP1Q9NZ09 502 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 VPS29Q9UBQ0 182 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RUVBL1Q9Y265 456 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 KCNE2Q9Y6J6 123 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SMIM31A0A1B0GVY4 71 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 TMEM202A6NGA9 273 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 GSTA4O15217 222 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 DFNA5O60443 496 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 MYO1DO94832 1006 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RASAL1O95294 804 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SOD1P00441 154 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 PABPC4LP0CB38 370 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RAP2AP10114 183 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 C6P13671 934 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 IL1RNP18510 177 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SDC1P18827 310 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 OXTRP30559 389 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NRIP1P48552 1158 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 TRPC1P48995 793 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 MTPNP58546 118 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NAE1Q13564 534 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 LIN52Q52LA3 116 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF648Q5T619 568 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 GPR180Q86V85 440 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 CARM1Q86X55 608 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 DTWD1Q8N5C7 304 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 KRTCAP2Q8N6L1 136 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 PKP4Q99569 1192 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SLC29A1Q99808 456 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 TRIM8Q9BZR9 551 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ITM2CQ9NQX7 267 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ITM2BQ9Y287 266 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 DLGAP4Q9Y2H0 992 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RNF103-CHMP3A0A140T963 221 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 ELOVL7A1L3X0 281 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 TBC1D3BA6NDS4 549 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 FAM220BPB1ANY3 271 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 NPC1O15118 1278 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 PRAMEF4O60810 478 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 LILRB5O75023 590 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 C1orf105O95561 183 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 SLC16A8O95907 504 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 RETP07949 1114 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 NCK1P16333 377 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 IMPA1P29218 277 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 ASMTP46597 345 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 PREPP48147 710 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 NEK2P51955 445 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CHRNB3Q05901 458 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 FCHO2Q0JRZ9 810 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 MTAPQ13126 283 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 DOC2AQ14183 400 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 PRAMEF9Q5VWM5 478 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 RAET1GQ6H3X3 334 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CAPN13Q6MZZ7 669 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 GPR149Q86SP6 731 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CBR4Q8N4T8 237 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF548Q8NEK5 533 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 VN1R2Q8NFZ6 395 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 HM13Q8TCT9 377 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 TFAP2CQ92754 450 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 WDR34Q96EX3 536 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CHID1Q9BWS9 393 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 PAIP1Q9H074 479 aaKnown RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 EHD1Q9H4M9 534 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 KAT8Q9H7Z6 458 aaKnown RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 CD320Q9NPF0 282 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 HPS4Q9NQG7 708 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 PNPLA3Q9NST1 481 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 THAP10Q9P2Z0 257 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF639Q9UID6 485 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 INVSQ9Y283 1065 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 ATG2AQ2TAZ0 1938 aa11.59□□□□□ -0.55
USP6NL-206ENST00000609853 KLHL33A6NCF5 533 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 SOCS2O14508 198 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 CLPTM1O96005 669 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 HLA-EP13747 358 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 CKMT2P17540 419 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 KIR3DL1P43629 444 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 ACSM2AQ08AH3 577 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 LRRC74AQ0VAA2 488 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms