RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CCDC177Q9NQR7 707 aaPredicted RBP13.75□□□□□ -0.21
CTSA-219ENST00000607841 SIDT1Q9NXL6 827 aaKnown RBP13.75□□□□□ -0.21
CTSA-219ENST00000607841 IKZF3Q9UKT9 509 aa13.75□□□□□ -0.21
CTSA-219ENST00000607841 UNC13CQ8NB66 2214 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CDRT15L2A8MXV6 281 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 C1QTNF9BB2RNN3 333 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 KLHL2O95198 593 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 SHBGP04278 402 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 NUDT17P0C025 328 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 C1QTNF9P0C862 333 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 COL6A2P12110 1019 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PVRP15151 417 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CD82P27701 267 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 GCAP28676 217 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 ETV5P41161 510 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MAGEA12P43365 314 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CSRP3P50461 194 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 SH3BP2P78314 561 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 IFFO1Q0D2I5 559 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 TUBB3Q13509 450 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 ACAP2Q15057 778 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CDKL4Q5MAI5 379 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CAPN13Q6MZZ7 669 aaPredicted RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 SUSD1Q6UWL2 747 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 TRIM73Q86UV7 250 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PPP1R3BQ86XI6 285 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 TDRPQ86YL5 185 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 GPSM1Q86YR5 675 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 TCAIMQ8N3R3 496 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PPFIBP2Q8ND30 876 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 OR2L3Q8NG85 312 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 OR8K5Q8NH50 307 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MDM1Q8TC05 714 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 N4BP2L2Q92802 583 aaPredicted RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 FGF11Q92914 225 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MED8Q96G25 268 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MIPEPQ99797 713 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 UNKQ9C0B0 810 aaKnown RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 ATG10Q9H0Y0 220 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 MRPS30Q9NP92 439 aaKnown RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 RARRES3Q9UL19 164 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 RNF112Q9ULX5 631 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 PTPRBP23467 1997 aa13.74□□□□□ -0.21
CTSA-219ENST00000607841 COL27A1Q8IZC6 1860 aaPredicted RBP13.74□□□□□ -0.21
CTSA-219ENST00000607841 SYCE1LA8MT33 242 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 C9orf172C9J069 976 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 CDH16O75309 829 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ERLIN1O75477 346 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
CTSA-219ENST00000607841 EBLN1P0CF75 366 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 FGF5P12034 268 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 FOLR1P15328 257 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 TFEBP19484 476 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 MAGP20916 626 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 HRH2P25021 359 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 SLC5A2P31639 672 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 TBPL1P62380 186 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 NAE1Q13564 534 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 KCNAB1Q14722 419 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 RASA2Q15283 850 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 TGFBIQ15582 683 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 TSNAXIP1Q2TAA8 658 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ZC3H12BQ5HYM0 836 aaKnown RBP13.73□□□□□ -0.21
CTSA-219ENST00000607841 PRAMEF13Q5VWM6 474 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ICE2Q659A1 982 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 FIGLAQ6QHK4 219 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 MBOAT1Q6ZNC8 495 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ISCA2Q86U28 154 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 LRRC56Q8IYG6 542 aaPredicted RBP13.73□□□□□ -0.21
CTSA-219ENST00000607841 MREGQ8N565 214 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 RHEBL1Q8TAI7 183 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
CTSA-219ENST00000607841 NXNL1Q96CM4 212 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 FCRL4Q96PJ5 515 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 HAUS8Q9BT25 410 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ALG9Q9H6U8 611 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 FGF21Q9NSA1 209 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 IGSF5Q9NSI5 407 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ABCF3Q9NUQ8 709 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 ANKMY1Q9P2S6 941 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 TAC3Q9UHF0 121 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 SERTAD3Q9UJW9 196 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 KLK4Q9Y5K2 254 aa13.73□□□□□ -0.21
CTSA-219ENST00000607841 PRAMEF10O60809 474 aa13.72□□□□□ -0.21
CTSA-219ENST00000607841 KERAO60938 352 aa13.72□□□□□ -0.21
CTSA-219ENST00000607841 PSMB5P28074 263 aa13.72□□□□□ -0.21
CTSA-219ENST00000607841 GRIA3P42263 894 aa13.72□□□□□ -0.21
CTSA-219ENST00000607841 IRF9Q00978 393 aa13.72□□□□□ -0.21
CTSA-219ENST00000607841 DLG1Q12959 904 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms