RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 WDR47O94967 919 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 OR4F21O95013 312 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 LYNP07948 512 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 UBTFL6P0CB48 400 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 CD38P28907 300 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 GGT5P36269 586 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 ERVPABLB-1P60509 514 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 GALNT1Q10472 559 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 RNF220Q5VTB9 566 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 PRAMEF9Q5VWM5 478 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 SLC36A4Q6YBV0 504 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 PDSS2Q86YH6 399 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 HPS6Q86YV9 775 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 C1orf210Q8IVY1 113 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 C2orf73Q8N5S3 287 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 FBXO15Q8NCQ5 510 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 CCDC124Q96CT7 223 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 WDR55Q9H6Y2 383 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 IPPKQ9H8X2 491 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 PDP2Q9P2J9 529 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 ACSL5Q9ULC5 683 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 SLC22A14Q9Y267 594 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TDRKHQ9Y2W6 561 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TIMM22Q9Y584 194 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TNPO3Q9Y5L0 923 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 DGKBQ9Y6T7 804 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TTC28Q96AY4 2481 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 GOLGA8QA0A0J9YX86 632 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 GOLGA8OA6NCC3 632 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 GOLGA8NF8WBI6 632 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 FESP07332 822 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 MTTPP55157 894 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 C1orf61Q13536 156 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 NAE1Q13564 534 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 UGT3A2Q3SY77 523 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 CDKL4Q5MAI5 379 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 WDR5BQ86VZ2 330 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 DCUN1D3Q8IWE4 304 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 OR5K2Q8NHB8 316 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 CCDC138Q96M89 665 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 OR4K3Q96R72 315 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 ZNF382Q96SR6 550 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 MENTQ9BUN1 341 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 INTS7Q9NVH2 962 aaKnown RBP16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 SH2B3Q9UQQ2 575 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 GON4LQ3T8J9 2241 aa16.81■□□□□ 0.28
PPFIA3-207ENST00000602716 A6NCN8 305 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 IFRD1O00458 451 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TOR1BO14657 336 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 KATNA1O75449 491 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 IDSP22304 550 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 HK2P52789 917 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 RACK1P63244 317 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 UAP1L1Q3KQV9 507 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 PRAMEF14Q5SWL7 426 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 FOXB2Q5VYV0 432 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 KANK2Q63ZY3 851 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 LRRC70Q7Z2Q7 622 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 PARGQ86W56 976 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 PHACTR4Q8IZ21 702 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 RGL4Q8IZJ4 473 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 OR4F6Q8NGB9 312 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 OR9A1PQ8NGU1 263 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 PATE1Q8WXA2 126 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 JPH3Q8WXH2 748 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 MED8Q96G25 268 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TRAPPC9Q96Q05 1148 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TSC22D3Q99576 134 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 DUSP15Q9H1R2 295 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TUBB1Q9H4B7 451 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 EML4Q9HC35 981 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 BTRCQ9Y297 605 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TRAF6Q9Y4K3 522 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 KLHL33A6NCF5 533 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 ENO4A6NNW6 628 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 HDAC3O15379 428 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 AHCYL1O43865 530 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 HNMTP50135 292 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 HTR6P50406 440 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TBPL1P62380 186 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 RPE65Q16518 533 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 SUSD1Q6UWL2 747 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 LRRC56Q8IYG6 542 aaPredicted RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TCAIMQ8N3R3 496 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 CDYL2Q8N8U2 506 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 MFSD2AQ8NA29 543 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 STON2Q8WXE9 905 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 LRRC61Q9BV99 259 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 DNAJC15Q9Y5T4 150 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 NCOR1O75376 2440 aa16.8■□□□□ 0.28
PPFIA3-207ENST00000602716 TRBV23OR9-2A0A075B6M9 112 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 CCDC163A0A0D9SF12 145 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 AZIN1O14977 448 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 ESRRBO95718 433 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 MLYCDO95822 493 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms