RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C19orf43Q9BQ61 176 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 SLC22A14Q9Y267 594 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 DIRAS1O95057 198 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 IL1RNP18510 177 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 ITPKAP23677 461 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 CSNK1DP48730 415 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 GTF2H3Q13889 308 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 BOP1Q14137 746 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 SIM2Q14190 667 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 DCDC5Q6ZRR9 648 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 LRRC70Q7Z2Q7 622 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 CD99L2Q8TCZ2 262 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 TESCQ96BS2 214 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 PPP1R14BQ96C90 147 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 THG1LQ9NWX6 298 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 ARHGEF15O94989 841 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 INHAP05111 366 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 AOAHP28039 575 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 MAGEA2P43356 314 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 CYP4F8P98187 520 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 TOP3AQ13472 1001 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 ATP1A4Q13733 1029 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 NR1D2Q14995 579 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 PLEKHG6Q3KR16 790 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 SHQ1Q6PI26 577 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 TPRG1Q6ZUI0 275 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 DEFB128Q7Z7B8 93 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 SCRN2Q96FV2 425 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 CMTM7Q96FZ5 175 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 COX4I2Q96KJ9 171 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 LYSMD1Q96S90 227 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 SLC12A9Q9BXP2 914 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 ABCB8Q9NUT2 735 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 CD84Q9UIB8 345 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 ENPP5Q9UJA9 477 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 NAALAD2Q9Y3Q0 740 aa19.66■□□□□ 0.74
SHKBP1-225ENST00000600733 BOLA2-SMG1P6H3BVE0 249 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ALDH1A1P00352 501 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 SOD2P04179 222 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ITIH1P19827 911 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 FMO3P31513 532 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 RYKP34925 604 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 GGTA1PQ4G0N0 100 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ZCCHC8Q6NZY4 707 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 PIWIL3Q7Z3Z3 882 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 FAM217AQ8IXS0 508 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 PIK3C3Q8NEB9 887 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 OR7A2PQ8NGA2 310 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 P2RY13Q9BPV8 354 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ATG10Q9H0Y0 220 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 RIBC2Q9H4K1 309 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 IL21Q9HBE4 155 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 AASDHPPTQ9NRN7 309 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 OBSL1O75147 1896 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 MKI67P46013 3256 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 MYO1GB0I1T2 1018 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 hCG_2039718K7EN88 272 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 MTX2O75431 263 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 CCNDBP1O95273 360 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ANGPTL1O95841 491 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 HIST1H2AGP0C0S8 130 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ZNF12P17014 697 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 AMD1P17707 334 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 HIST1H2ADP20671 130 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 SLC6A12P48065 614 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 EMX1Q04741 257 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 CTF1Q16619 201 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 SPOUT1Q5T280 376 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 CENPSQ8N2Z9 138 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ABHD11Q8NFV4 315 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 TRUB1Q8WWH5 349 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 ASB11Q8WXH4 323 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 HIST1H2AHQ96KK5 128 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 HIST1H2AJQ99878 128 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 H2AFJQ9BTM1 129 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 REXO4Q9GZR2 422 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 TRIT1Q9H3H1 467 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 TMPRSS11EQ9UL52 423 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 INSL5Q9Y5Q6 135 aa19.65■□□□□ 0.74
SHKBP1-225ENST00000600733 CBFA2T3O75081 653 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 OLFM2O95897 454 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 CKMP06732 381 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 ITGAMP11215 1152 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 KIR3DL1P43629 444 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 DAPP51397 102 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 EPHB3P54753 998 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 RFX4Q33E94 735 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 ZC3H12BQ5HYM0 836 aaKnown RBP19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 CDKL4Q5MAI5 379 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 NOXRED1Q6NXP6 359 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 CYP2U1Q7Z449 544 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 VTCN1Q7Z7D3 282 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 MCOLN3Q8TDD5 553 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 FBLIM1Q8WUP2 373 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 MYOCQ99972 504 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 CFAP97Q9P2B7 532 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 SAMD4AQ9UPU9 718 aaKnown RBP19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 ERVK-11Q9UQG0 969 aa19.64■□□□□ 0.74
SHKBP1-225ENST00000600733 PQBP1O60828 265 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms