RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 FAM117AQ9C073 453 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 FAM60AQ9NP50 221 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 SMYD2Q9NRG4 433 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 CIDEBQ9UHD4 219 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 PSAT1Q9Y617 370 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 HEATR5BQ9P2D3 2071 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 FER1L5A0AVI2 2057 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 TCRBV9S1A1TA0A576 114 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 FAM159BA6NKW6 160 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 TARM1B6A8C7 271 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 ZBTB14O43829 449 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 SCRG1O75711 98 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 TSPAN12O95859 305 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 LIFP15018 202 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 MAGEA4P43358 317 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 GPX6P59796 221 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 SLC7A5Q01650 507 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 SRSF6Q13247 344 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 NAA25Q14CX7 972 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 CRTC2Q53ET0 693 aaPredicted RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 PAQR3Q6TCH7 311 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 ZNF517Q6ZMY9 492 aaPredicted RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 CEP128Q6ZU80 1094 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 PIWIL4Q7Z3Z4 852 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 MYO1HQ8N1T3 1032 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 DNAJC22Q8N4W6 341 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 CEP112Q8N8E3 955 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 NOA1Q8NC60 698 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 GALNT6Q8NCL4 622 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 OR2A1Q8NGT9 310 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 OR1L3Q8NH93 324 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 EEF1AKMT1Q8WVE0 214 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 SMPDL3AQ92484 453 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 ZUFSPQ96AP4 578 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 KIAA1143Q96AT1 154 aaPredicted RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 PDLIM5Q96HC4 596 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 PKP4Q99569 1192 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 OLFM1Q99784 485 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 SLC12A9Q9BXP2 914 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 RHOJQ9H4E5 214 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 POPDC3Q9HBV1 291 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 TSR3Q9UJK0 312 aaKnown RBP15.57■□□□□ 0.08
LSM4-206ENST00000600289 NOTCH2Q04721 2471 aa15.57■□□□□ 0.08
LSM4-206ENST00000600289 LOC101059948A0A1B0GTJ6 334 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 ESYT3A0FGR9 886 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 KRT87PA6NCN2 255 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 TMEM150CB9EJG8 249 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 MAGP20916 626 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 PNLIPRP1P54315 467 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 ITGA1P56199 1179 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 NFATC3Q12968 1075 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 SF1Q15637 639 aaKnown RBP15.56■□□□□ 0.08
LSM4-206ENST00000600289 KIAA1614Q5VZ46 1190 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 C3orf62Q6ZUJ4 267 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 UBE2R2Q712K3 238 aaPredicted RBP15.56■□□□□ 0.08
LSM4-206ENST00000600289 RELL1Q8IUW5 271 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 TMEM126BQ8IUX1 230 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 LRRC56Q8IYG6 542 aaPredicted RBP15.56■□□□□ 0.08
LSM4-206ENST00000600289 GPATCH11Q8N954 259 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 ZSCAN1Q8NBB4 408 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 OR2L3Q8NG85 312 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 ANKRD7Q92527 254 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 SLC45A3Q96JT2 553 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 KLHL25Q9H0H3 589 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 LHX9Q9NQ69 397 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 DMGDHQ9UI17 866 aaKnown RBP15.56■□□□□ 0.08
LSM4-206ENST00000600289 SERTAD3Q9UJW9 196 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 PCDHGA6Q9Y5G7 932 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 ANKRD12Q6UB98 2062 aa15.56■□□□□ 0.08
LSM4-206ENST00000600289 TLN1Q9Y490 2541 aaKnown RBP15.56■□□□□ 0.08
LSM4-206ENST00000600289 MDC1Q14676 2089 aaKnown RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 FAM95CA0A1B0GW59 222 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 E7EQ34 232 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 SLC16A8O95907 504 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 HBQ1P09105 142 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 CCNYL3P0C7X3 344 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 ZNF37AP17032 561 aaPredicted RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 WT1P19544 449 aaPredicted RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 CYP2A7P20853 494 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 STX2P32856 288 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 RORAP35398 523 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 IL2P60568 153 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 NAB1Q13506 487 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 FASTKQ14296 549 aaKnown RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 FCRL6Q6DN72 434 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 C2orf73Q8N5S3 287 aaPredicted RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 ZNF480Q8WV37 535 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 DLG3Q92796 817 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 LINGO1Q96FE5 620 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 VPS39Q96JC1 886 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 CPNE1Q99829 537 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 TSPYL1Q9H0U9 437 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 GPN2Q9H9Y4 310 aaPredicted RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 PARVBQ9HBI1 364 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 LRRC4CQ9HCJ2 640 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.55■□□□□ 0.08
LSM4-206ENST00000600289 PADI1Q9ULC6 663 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms