RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR13J1Q8NGT2 312 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 OR2A1Q8NGT9 310 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 OR2L8Q8NGY9 312 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 DNAJB8Q8NHS0 232 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 LKAAEAR1Q8TD35 194 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 DENND1AQ8TEH3 1009 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ELMO1Q92556 727 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ZUFSPQ96AP4 578 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 IMMP1LQ96LU5 166 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 C10orf90Q96M02 699 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 FAM118BQ9BPY3 351 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 CRB3Q9BUF7 120 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 OSBPL8Q9BZF1 889 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 RUBCNLQ9H714 662 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ZNF160Q9HCG1 818 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ABHD10Q9NUJ1 306 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ABI3Q9P2A4 366 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 STOX2Q9P2F5 926 aaPredicted RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 IMPACTQ9P2X3 320 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 CIDEBQ9UHD4 219 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 NXT1Q9UKK6 140 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 MRPS2Q9Y399 296 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 MAU2Q9Y6X3 613 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 IGHV1-45A0A0A0MS14 117 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 TRAV17A0A0B4J275 112 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SYCE3A1L190 88 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 HYKKA2RU49 373 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 OR2A25A4D2G3 310 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 KRT87PA6NCN2 255 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 RCCD1A6NED2 376 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 IQCF5A8MTL0 148 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 QSOX1O00391 747 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CCL21O00585 134 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 RASGRF2O14827 1237 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 PJA2O43164 708 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 MFAP3LO75121 409 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 USP1O94782 785 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 FKBP9O95302 570 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 BMP10O95393 424 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 WDPCPO95876 746 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 FTH1P02794 183 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ACPPP15309 386 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 MSNP26038 577 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 AOAHP28039 575 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 MAGEA1P43355 309 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CARSP49589 748 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 EMP2P54851 167 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 EMP3P54852 163 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 VSX2P58304 361 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 ACVR1Q04771 509 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SEMA3AQ14563 771 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 NAA30Q147X3 362 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 POU6F1Q14863 301 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 INAQ16352 499 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 KRTAP21-3Q3LHN1 58 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CCSMST1Q4G0I0 132 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 C11orf63Q6NUN7 778 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 PRMT9Q6P2P2 845 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 DARS2Q6PI48 645 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 XKRXQ6PP77 449 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 TMEM205Q6UW68 189 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 TMEM207Q6UWW9 146 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 GFRALQ6UXV0 394 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SPNS3Q6ZMD2 512 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 Q6ZPB1 254 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 NDUFAF7Q7L592 441 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 NLRP9Q7RTR0 991 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 GDF7Q7Z4P5 450 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CCDC50Q8IVM0 306 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CDKL3Q8IVW4 592 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 VSTM4Q8IW00 320 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 KBTBD2Q8IY47 623 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 PRSS58Q8IYP2 241 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SHISA5Q8N114 240 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 HMGCLL1Q8TB92 370 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 BRIX1Q8TDN6 353 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 HDAC10Q969S8 669 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SLC22A18Q96BI1 424 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 MIEF2Q96C03 454 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ZNF778Q96MU6 729 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 TREX2Q9BQ50 279 aaPredicted RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 SELENOSQ9BQE4 189 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CARD6Q9BX69 1037 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 RNF32Q9H0A6 362 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ZNF304Q9HCX3 659 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 CHST11Q9NPF2 352 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ZNHIT6Q9NWK9 470 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 PIH1D1Q9NWS0 290 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 IRAK4Q9NWZ3 460 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 PTGFRNQ9P2B2 879 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 SLC2A6Q9UGQ3 507 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ZC3H7BQ9UGR2 993 aaKnown RBP5.82□□□□□ -1.48
VRK3-220ENST00000600259 C3orf18Q9UK00 162 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 RIMKLBQ9ULI2 386 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 ZNF835Q9Y2P0 537 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 MED13LQ71F56 2210 aa5.82□□□□□ -1.48
VRK3-220ENST00000600259 TRGV8A0A0C4DH27 118 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 IGKV1-8A0A0C4DH67 115 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms