RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 RAB42Q8N4Z0 105 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 LMNTD1Q8N9Z9 388 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 PNPLA2Q96AD5 504 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 PTERQ96BW5 349 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 SERPINB12Q96P63 405 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 MAP10Q9P2G4 905 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 MRFAP1Q9Y605 127 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 HIVEP3Q5T1R4 2406 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 A0A1B0GX78 115 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 KPNA5O15131 536 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 RAD51CO43502 376 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 GP1BBP13224 206 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 ARSFP54793 590 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 EIF3BP55884 814 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 SARNPP82979 210 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 GRB7Q14451 532 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 INPP5JQ15735 1006 aaPredicted RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 CYP2A13Q16696 494 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 ZC3H12BQ5HYM0 836 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 MRPL14Q6P1L8 145 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 TTLL10Q6ZVT0 673 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 MCATQ8IVS2 390 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 RBMXL3Q8N7X1 1067 aaKnown RBP17.98■□□□□ 0.47
PNKP-213ENST00000599543 RAD51AP1Q96B01 352 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 MFSD3Q96ES6 412 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 P2RY12Q9H244 342 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 DPH5Q9H2P9 285 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 P4HTMQ9NXG6 502 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 IL1RAPL1Q9NZN1 696 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 C5AR2Q9P296 337 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 SNX24Q9Y343 169 aa17.98■□□□□ 0.47
PNKP-213ENST00000599543 DOCK10Q96BY6 2186 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 BLACEA4D250 179 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 GOLGA8KD6RF30 607 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 GOLGA8TH3BQL2 631 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 KLHL41O60662 606 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 CNOT3O75175 753 aaKnown RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 AGFG2O95081 481 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 F7P08709 466 aaPredicted RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 RPS3P23396 243 aaKnown RBP eCLIP17.97■□□□□ 0.47
PNKP-213ENST00000599543 VARSP26640 1264 aaKnown RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 FOXL2P58012 376 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 DHX34Q14147 1143 aaKnown RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 PRR30Q53SZ7 412 aaPredicted RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 HP1BP3Q5SSJ5 553 aaPredicted RBP17.97■□□□□ 0.47
PNKP-213ENST00000599543 FHL5Q5TD97 284 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 GALNT16Q8N428 558 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 Q8NA96 180 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 MCUQ8NE86 351 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 FOPNLQ96NB1 174 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 RUNDC3BQ96NL0 473 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 LRRC4CQ9HCJ2 640 aa17.97■□□□□ 0.47
PNKP-213ENST00000599543 EFCAB8A8MWE9 144 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 PFDN6O15212 129 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 FKBP9O95302 570 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 UMODP07911 640 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 PIM1P11309 404 aaPredicted RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 GRIA3P42263 894 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 BDKRB1P46663 353 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 RPL21P46778 160 aaKnown RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 ITGA8P53708 1063 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 GRM7Q14831 915 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 MYBPC3Q14896 1274 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 MSS51Q4VC12 460 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 TCTE1Q5JU00 501 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 RNF187Q5TA31 235 aaPredicted RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 FCRL6Q6DN72 434 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 MRNIPQ6NTE8 343 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 CNSTQ6PJW8 725 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 FIGLAQ6QHK4 219 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 SYDE1Q6ZW31 735 aaPredicted RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 PPP1R32Q7Z5V6 425 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 SDCCAG8Q86SQ7 713 aaPredicted RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 FKBP10Q96AY3 582 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 PSMG3-AS1Q96PY0 264 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 SELENOSQ9BQE4 189 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 SLC29A3Q9BZD2 475 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 MRM3Q9HC36 420 aaKnown RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 CUTCQ9NTM9 273 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 SOX13Q9UN79 622 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 RUVBL2Q9Y230 463 aaKnown RBP17.96■□□□□ 0.47
PNKP-213ENST00000599543 NFS1Q9Y697 457 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 MAD1L1Q9Y6D9 718 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 CNTRLQ7Z7A1 2325 aa17.96■□□□□ 0.47
PNKP-213ENST00000599543 DSCR3O14972 297 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 IPO13O94829 963 aaKnown RBP17.95■□□□□ 0.46
PNKP-213ENST00000599543 VAPBO95292 243 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 C1orf105O95561 183 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 CCNFP41002 786 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 GCGRP47871 477 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 CTSL3PQ5NE16 218 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 YOD1Q5VVQ6 348 aaPredicted RBP17.95■□□□□ 0.46
PNKP-213ENST00000599543 TTC29Q8NA56 475 aaPredicted RBP17.95■□□□□ 0.46
PNKP-213ENST00000599543 MAGEC3Q8TD91 643 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 ZUFSPQ96AP4 578 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 ZNF669Q96BR6 464 aaPredicted RBP17.95■□□□□ 0.46
PNKP-213ENST00000599543 KIFC1Q9BW19 673 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 SLC22A11Q9NSA0 550 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms