RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	GUCA1C	O95843	209 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	CCL4	P13236	92 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	PVR	P15151	417 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	TYK2	P29597	1187 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	PNLIPRP1	P54315	467 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	KIR2DS3	Q14952	304 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	PHKG1	Q16816	387 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	THEMIS2	Q5TEJ8	643 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	ARHGAP22	Q7Z5H3	698 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	BANP	Q8N9N5	519 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	MAGEB18	Q96M61	343 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	CCT8L2	Q96SF2	557 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	VPS11	Q9H270	941 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	ZNF768	Q9H5H4	540 aa	Known RBP	19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	WDR70	Q9NW82	654 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	OCIAD1	Q9NX40	245 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	ARL15	Q9NXU5	204 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	PDP2	Q9P2J9	529 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808	EPG5	Q9HCE0	2579 aa		19.42	■□□□□ 0.7
IRF3-221	ENST00000598808		A0A1W2PNU3	283 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC9B1P1	A6NJY1	282 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	TOX3	O15405	576 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	BRINP1	O60477	761 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC16A8	O95907	504 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ANKRD34C	P0C6C1	535 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	CREB1	P16220	341 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	PEBP1	P30086	187 aa	Known RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	RPA3	P35244	121 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	GMPR	P36959	345 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	MLLT3	P42568	568 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	LSS	P48449	732 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	CYP4F3	Q08477	520 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	FASTK	Q14296	549 aa	Known RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SF1	Q15637	639 aa	Known RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ZKSCAN8	Q15776	578 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SUSD1	Q6UWL2	747 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	RGS9BP	Q6ZS82	235 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	FAM20C	Q8IXL6	584 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	DLG3	Q92796	817 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	EXT2	Q93063	718 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC22A18	Q96BI1	424 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	MED8	Q96G25	268 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	APOPT1	Q96IL0	206 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ZNF317	Q96PQ6	595 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	EGFL8	Q99944	293 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	MENT	Q9BUN1	341 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ACAT2	Q9BWD1	397 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC12A9	Q9BXP2	914 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC39A1	Q9NY26	324 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	IKZF3	Q9UKT9	509 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808		A0A0J9YY10	115 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808		A0A1W2PPM1	405 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	TRIM49D1	C9J1S8	452 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ZBTB11	O95625	1053 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	PSMB5	P28074	263 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	HSD17B2	P37059	387 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ETV5	P41161	510 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	MPP2	Q14168	576 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	KCNAB1	Q14722	419 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	TSN	Q15631	228 aa	Known RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ADAMTSL2	Q86TH1	951 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ANKRD42	Q8N9B4	389 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	FBXO15	Q8NCQ5	510 aa	Predicted RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	GATA6	Q92908	595 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	PDLIM5	Q96HC4	596 aa	Known RBP	19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	CCDC138	Q96M89	665 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	OR2A14	Q96R47	310 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	DERL2	Q9GZP9	239 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	C1GALT1	Q9NS00	363 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808	ACOT9	Q9Y305	439 aa		19.41	■□□□□ 0.7
IRF3-221	ENST00000598808		A0A087X1B8	175 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808		A0A096LPK6	155 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	C1QTNF9B	B2RNN3	333 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	C1QTNF9	P0C862	333 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	EBLN1	P0CF75	366 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	SLC35E2B	P0CK96	405 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	ST6GAL1	P15907	406 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	SH3BP2	P78314	561 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	IRF9	Q00978	393 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	CYP2A13	Q16696	494 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	TMTC4	Q5T4D3	741 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	UNQ6494/PRO21346	Q6UXR6	183 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	SH2D5	Q6ZV89	423 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	C4orf33	Q8N1A6	199 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	ZNF480	Q8WV37	535 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	SMPDL3A	Q92484	453 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	MIPEP	Q99797	713 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	CTRC	Q99895	268 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	CCDC86	Q9H6F5	360 aa	Known RBP	19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	STOX2	Q9P2F5	926 aa	Predicted RBP	19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	KLHL20	Q9Y2M5	609 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	PCDHGA8	Q9Y5G5	932 aa		19.4	■□□□□ 0.7
IRF3-221	ENST00000598808	USP24	Q9UPU5	2620 aa		19.39	■□□□□ 0.7
IRF3-221	ENST00000598808	HMX2	A2RU54	273 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	NCF1B	A6NI72	391 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	NCF1C	A8MVU1	366 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	ENO2	P09104	434 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	FGF3	P11487	239 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	NCF1	P14598	390 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	NELFE	P18615	380 aa	Known RBP	19.39	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms