RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MAGP20916 626 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 IMPA1P29218 277 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 CMPK1P30085 196 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 SERPINB8P50452 374 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 AP1S2P56377 157 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 CSHL1Q14406 222 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 SLC29A2Q14542 456 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 IL11RAQ14626 422 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 ERCC6LQ2NKX8 1250 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 TAF1BQ53T94 588 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 THEMIS2Q5TEJ8 643 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 TBC1D1Q86TI0 1168 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 N4BP2L2Q92802 583 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 TCTN2Q96GX1 697 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 MIPEPQ99797 713 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 ACAT2Q9BWD1 397 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 SNX15Q9NRS6 342 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 FGF21Q9NSA1 209 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 UTP6Q9NYH9 597 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 IKZF3Q9UKT9 509 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 NOVA2Q9UNW9 492 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 AHCTF1Q8WYP5 2266 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 DMXL2Q8TDJ6 3036 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 E7ENX8 843 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 CCNDBP1O95273 360 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 GUCA1CO95843 209 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 CNTFP26441 200 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 CD82P27701 267 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 ATP6V0D1P61421 351 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 TAP2Q03519 686 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 TSNQ15631 228 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 GPR19Q15760 415 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 AGTRAPQ6RW13 159 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 SBSNQ6UWP8 590 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 PPP1R3BQ86XI6 285 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 SPATA6LQ8N4H0 392 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 ZNF248Q8NDW4 579 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 OR2A1Q8NGT9 310 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 DCAKDQ8WVC6 231 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 DCBLD2Q96PD2 775 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 CCDC77Q9BR77 488 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 CCDC177Q9NQR7 707 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 TAC3Q9UHF0 121 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 ZNF180Q9UJW8 692 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 TLK1Q9UKI8 766 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 KLHL20Q9Y2M5 609 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 RAXQ9Y2V3 346 aa18.94■□□□□ 0.62
SHKBP1-214ENST00000597396 A0A087X1B8 175 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 HMX2A2RU54 273 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 SLC35E2BP0CK96 405 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 FGF5P12034 268 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 CD1DP15813 335 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 TYK2P29597 1187 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 NAA25Q14CX7 972 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 LGSNQ5TDP6 509 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 KIAA1614Q5VZ46 1190 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 WDR93Q6P2C0 686 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 FIGLAQ6QHK4 219 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 CCDC91Q7Z6B0 441 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 BPHLQ86WA6 291 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ZFAND4Q86XD8 727 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 OR2L3Q8NG85 312 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ATL1Q8WXF7 558 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ALKBH8Q96BT7 664 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 MED8Q96G25 268 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 NAF1Q96HR8 494 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 EGFL8Q99944 293 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ATG10Q9H0Y0 220 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 EPB41L4BQ9H329 900 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 MRPS30Q9NP92 439 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 WDR70Q9NW82 654 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ACOT9Q9Y305 439 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 OARD1Q9Y530 152 aa18.93■□□□□ 0.62
SHKBP1-214ENST00000597396 ATRXP46100 2492 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 TMEM150CB9EJG8 249 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 RRP8O43159 456 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 C2P06681 752 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 LTA4HP09960 611 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 GMPRP36959 345 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 TBPL1P62380 186 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 NAE1Q13564 534 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 ZIC1Q15915 447 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 PPP1R3AQ16821 1122 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 ICE2Q659A1 982 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 CDHR3Q6ZTQ4 885 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 LRRC56Q8IYG6 542 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 OR8K5Q8NH50 307 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 KCNE4Q8WWG9 221 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 FBXL8Q96CD0 374 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 UBXN10Q96LJ8 280 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 NMRAL1Q9HBL8 299 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 FAM60AQ9NP50 221 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 ACSL6Q9UKU0 697 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 DSPP15924 2871 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 FREM2Q5SZK8 3169 aa18.92■□□□□ 0.62
SHKBP1-214ENST00000597396 A0A096LPK6 155 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 TRIM49D1C9J1S8 452 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 STMND1H3BQB6 276 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 ALDOAP04075 364 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 ANXA5P08758 320 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms