RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 ADAMTS17Q8TE56 1095 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 N4BP2L2Q92802 583 aaPredicted RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 GBP5Q96PP8 586 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 KRT12Q99456 494 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 DHRS4Q9BTZ2 278 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 SLC25A18Q9H1K4 315 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 ZC3H7BQ9UGR2 993 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 SRPK3Q9UPE1 567 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 KLHL20Q9Y2M5 609 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 ONECUT2O95948 504 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 AGXTP21549 392 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 PSMB5P28074 263 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 RPS18P62269 152 aaKnown RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 CUL1Q13616 776 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 UGT3A1Q6NUS8 523 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 LRRC56Q8IYG6 542 aaPredicted RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 ENDOVQ8N8Q3 282 aaKnown RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 BBOF1Q8ND07 529 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 THAP4Q8WY91 577 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 SMPDL3AQ92484 453 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 PKP4Q99569 1192 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 TAS2R13Q9NYV9 303 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 MOCS1Q9NZB8 636 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 TCFL5Q9UL49 500 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
USE1-207ENST00000596136 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 CCDC88CQ9P219 2028 aa12.53□□□□□ -0.4
USE1-207ENST00000596136 CDC14CA4D256 554 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 OR2A25A4D2G3 310 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ZNF839A8K0R7 811 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 E7ENX8 843 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ZBTB14O43829 449 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 SRPX2O60687 465 aaPredicted RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 CTSVO60911 334 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 KLF7O75840 302 aaPredicted RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 SLC16A8O95907 504 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 CASQ1P31415 396 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 PMS2P54278 862 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 PNLIPRP1P54315 467 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 CDKN2DP55273 166 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 TAP2Q03519 686 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 RELAQ04206 551 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 IL10RAQ13651 578 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 NAA25Q14CX7 972 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 NCF4Q15080 339 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 PTCHD3Q3KNS1 767 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 TCTE1Q5JU00 501 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 RBM20Q5T481 1227 aaKnown RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 TRMT10BQ6PF06 316 aaKnown RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ZNF605Q86T29 641 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ZNF655Q8N720 491 aaPredicted RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 ZNF480Q8WV37 535 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 MIPEPQ99797 713 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 C17orf62Q9BQA9 187 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 TRIM31Q9BZY9 425 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 SLC7A5P2Q9GIP4 190 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 WHRNQ9P202 907 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 ANKMY1Q9P2S6 941 aa12.52□□□□□ -0.41
USE1-207ENST00000596136 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 MDC1Q14676 2089 aaKnown RBP12.52□□□□□ -0.41
USE1-207ENST00000596136 RAD51CO43502 376 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 TSPAN12O95859 305 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 CD63P08962 238 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 MCM3P25205 808 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 CMPK1P30085 196 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 ARSFP54793 590 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 YBX1P67809 324 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 DCDP81605 110 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 PDIA2Q13087 525 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 ZNF425Q6IV72 752 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 MRPL14Q6P1L8 145 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 FBXO42Q6P3S6 717 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 PAQR3Q6TCH7 311 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 RNF44Q7L0R7 432 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 PIWIL4Q7Z3Z4 852 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 DLG3Q92796 817 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 NDNQ99608 321 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 PLCD4Q9BRC7 762 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 MCMBPQ9BTE3 642 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms