RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 MAP7Q14244 749 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 GLE1Q53GS7 698 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 BROXQ5VW32 411 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 BPHLQ86WA6 291 aaPredicted RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 SPATA6LQ8N4H0 392 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 IL22RA1Q8N6P7 574 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 CEP112Q8N8E3 955 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 OR8K5Q8NH50 307 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 MAGEC3Q8TD91 643 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 SMPDL3AQ92484 453 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 PDLIM5Q96HC4 596 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 BBC3Q96PG8 261 aaPredicted RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 FCRL4Q96PJ5 515 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 RBBP8Q99708 897 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 RAB11FIP5Q9BXF6 653 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 L2HGDHQ9H9P8 463 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 SLC6A20Q9NP91 592 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 SH2B3Q9UQQ2 575 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 MRPS18BQ9Y676 258 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 ATRXP46100 2492 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 HMX2A2RU54 273 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 SLC16A5O15375 505 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 NKX2-8O15522 239 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 PHGDHO43175 533 aaKnown RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 ZNF749O43361 778 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 MED26O95402 600 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 C8GP07360 202 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ZNF37AP17032 561 aaPredicted RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 RORAP35398 523 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 GCGRP47871 477 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 RGS4P49798 205 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 UCNP55089 124 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ABHD18Q0P651 414 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ATMQ13315 3056 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ARHGAP19Q14CB8 494 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 FBXO42Q6P3S6 717 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ANKRD12Q6UB98 2062 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ZNF517Q6ZMY9 492 aaPredicted RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 GPR155Q7Z3F1 870 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 RELL1Q8IUW5 271 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 TMEM126BQ8IUX1 230 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 MCATQ8IVS2 390 aaKnown RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 TMEM151BQ8IW70 566 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 CTAGE3PQ8IX95 158 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 MYO1HQ8N1T3 1032 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 ESX1Q8N693 406 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 PPM1NQ8N819 430 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 CT55Q8WUE5 264 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 SLC22A18Q96BI1 424 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 CPNE1Q99829 537 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 UNKQ9C0B0 810 aaKnown RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 PARVBQ9HBI1 364 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 SYTL2Q9HCH5 934 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 LHX9Q9NQ69 397 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 STARD5Q9NSY2 213 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 PCMTD2Q9NV79 361 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 NSMCE4AQ9NXX6 385 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 EURLQ9NYK6 297 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 STOX2Q9P2F5 926 aaPredicted RBP10.71□□□□□ -0.69
VRK3-210ENST00000596121 TAC3Q9UHF0 121 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 CROTQ9UKG9 612 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 KLK4Q9Y5K2 254 aa10.71□□□□□ -0.69
VRK3-210ENST00000596121 SMG1Q96Q15 3661 aaKnown RBP10.71□□□□□ -0.7
VRK3-210ENST00000596121 LOC105369274A0A096LPK9 316 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 LOC102723532A0A0G2JNH3 316 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 OR2A25A4D2G3 310 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 NPEPPSL1A6NEC2 478 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 OR2B3O76000 313 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 CAPN1P07384 714 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 RHOXF2BP0C7M4 288 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ITGAXP20702 1163 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 DLSTP36957 453 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 GP5P40197 560 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ITGA1P56199 1179 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 SNRPNP63162 240 aaKnown RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 PRDX1Q06830 199 aaKnown RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 TSTA3Q13630 321 aaPredicted RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 ZKSCAN8Q15776 578 aaPredicted RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 PPP1R3AQ16821 1122 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ATP1A1-AS1Q5TC04 95 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 FAM69BQ5VUD6 431 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ICE2Q659A1 982 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ZNF385CQ66K41 422 aaPredicted RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 FRMPD2BQ6IN97 320 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 SBSNQ6UWP8 590 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 SYTL1Q8IYJ3 562 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 OR4N4Q8N0Y3 316 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 RAB42Q8N4Z0 105 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 DTWD1Q8N5C7 304 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 MCOLN3Q8TDD5 553 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 TTC9Q92623 222 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ZUFSPQ96AP4 578 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 CCDC138Q96M89 665 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ZNF285Q96NJ3 590 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 GPR22Q99680 433 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 RHOXF2Q9BQY4 288 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms