RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF783Q6ZMS7 281 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 CHPFQ8IZ52 775 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 TMEM132CQ8N3T6 1108 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 HPS1Q92902 700 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLC22A12Q96S37 553 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 BCL7BQ9BQE9 202 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 MAGIXQ9H6Y5 334 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 PCDH12Q9NPG4 1184 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ARL15Q9NXU5 204 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ORC6Q9Y5N6 252 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 A0A096LPI6 279 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 KDM1AO60341 852 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 NADKO95544 446 aaPredicted RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 ZNF682O95780 498 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CYP4B1P13584 511 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 LSM3P62310 102 aaKnown RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 SIM2Q14190 667 aaPredicted RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 GPNMBQ14956 572 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CCDC92Q53HC0 331 aaPredicted RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 MACC1Q6ZN28 852 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ZNF551Q7Z340 670 aaPredicted RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 HIPK1Q86Z02 1210 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ZDHHC21Q8IVQ6 265 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ZNF566Q969W8 418 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ALG14Q96F25 216 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CEP295NLQ96MC4 621 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 TRIT1Q9H3H1 467 aaKnown RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 NECTIN3Q9NQS3 549 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 RNF186Q9NXI6 227 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 INTS6Q9UL03 887 aaKnown RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 PPT2Q9UMR5 302 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 M0QX08 132 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 M0R3G1 203 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 PER2O15055 1255 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 RECQL5O94762 991 aaPredicted RBP16.06■□□□□ 0.16
LIG1-206ENST00000594067 ANXA5P08758 320 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ALDH4A1P30038 563 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 RPIAP49247 311 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CLDN8P56748 225 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 GTF2H3Q13889 308 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 ACOX1Q15067 660 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CDKN3Q16667 212 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 CARD16Q5EG05 197 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 LRIF1Q5T3J3 769 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 OR6Q1Q8NGQ2 317 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 EGLN2Q96KS0 407 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 RIBC2Q9H4K1 309 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 AP3M1Q9Y2T2 418 aa16.06■□□□□ 0.16
LIG1-206ENST00000594067 IGFBP5P24593 272 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 PTPN6P29350 595 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 FMO3P31513 532 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 SPAM1P38567 509 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 VBP1P61758 197 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 DGUOKQ16854 277 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 DOK6Q6PKX4 331 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 PLEKHG7Q6ZR37 379 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 DSG4Q86SJ6 1040 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 CYP4Z1Q86W10 505 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 ZSWIM9Q86XI8 627 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 NPAS4Q8IUM7 802 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 NXPE1Q8N323 547 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 MCOLN3Q8TDD5 553 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 RORBQ92753 470 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 GLMNQ92990 594 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 HTATIP2Q9BUP3 242 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 SLC29A3Q9BZD2 475 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 RDH14Q9HBH5 336 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 ERVK-18Q9QC07 812 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 ABCG2Q9UNQ0 655 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 KRT87PA6NCN2 255 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 DIRAS1O95057 198 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 ANGPTL1O95841 491 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
LIG1-206ENST00000594067 SELPP16109 830 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 HIST2H2ACQ16777 129 aaPredicted RBP16.05■□□□□ 0.16
LIG1-206ENST00000594067 ZXDCQ2QGD7 858 aaPredicted RBP16.05■□□□□ 0.16
LIG1-206ENST00000594067 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 CPZQ66K79 652 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 CEP68Q76N32 757 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 GALNT10Q86SR1 603 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 GPR26Q8NDV2 337 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 DYNC2LI1Q8TCX1 351 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 PYCR2Q96C36 320 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 YIPF6Q96EC8 236 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 APIPQ96GX9 242 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 SLC32A1Q9H598 525 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 ELOVL6Q9H5J4 265 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 RMND5AQ9H871 391 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 MAN2B2Q9Y2E5 1009 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 PCDHGA10Q9Y5H3 936 aa16.05■□□□□ 0.16
LIG1-206ENST00000594067 MYO1GB0I1T2 1018 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 MAP2K4P45985 399 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 ZC3H12BQ5HYM0 836 aaKnown RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 TMEM236Q5W0B7 351 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 OR4F3Q6IEY1 312 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 ZNF513Q8N8E2 541 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms