RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 PTGIRP43119 386 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 BDKRB1P46663 353 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 GCGRP47871 477 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CHAF1BQ13112 559 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 NEPROQ6NW34 567 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 TLDC1Q6P9B6 456 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 TTC23LQ6PF05 361 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CENPUQ71F23 418 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CILP2Q8IUL8 1156 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 SRRM1Q8IYB3 904 aaKnown RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 C2orf73Q8N5S3 287 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 ACTRT1Q8TDG2 376 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 SERPINB12Q96P63 405 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 C17orf62Q9BQA9 187 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 SLC29A3Q9BZD2 475 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 ING2Q9H160 280 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 EURLQ9NYK6 297 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 SAMD15Q9P1V8 674 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 SLC39A10Q9ULF5 831 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 RUVBL2Q9Y230 463 aaKnown RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 KLHL20Q9Y2M5 609 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 PCDHGB7Q9Y5F8 929 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 DOCK10Q96BY6 2186 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CCDC168Q8NDH2 2452 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 MAGEB16A2A368 324 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 KLF7O75840 302 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 CEACAM4O75871 244 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 MATN4O95460 622 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 VARSP26640 1264 aaKnown RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 CCNFP41002 786 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 MAGEA3P43357 314 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 FNTAP49354 379 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 DHX34Q14147 1143 aaKnown RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 CCSMST1Q4G0I0 132 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ANKRD20A4Q4UJ75 823 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 FCRL6Q6DN72 434 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 CNSTQ6PJW8 725 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ZNF655Q8N720 491 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 HMGCLL1Q8TB92 370 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 DENND1AQ8TEH3 1009 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 SKA2Q8WVK7 121 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ZNF669Q96BR6 464 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 FOPNLQ96NB1 174 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 OSBPL9Q96SU4 736 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ACSS2Q9NR19 701 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 INTS7Q9NVH2 962 aaKnown RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 INTS10Q9NVR2 710 aaKnown RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 IL1RAPL1Q9NZN1 696 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 DHCR7Q9UBM7 475 aaKnown RBP12.67□□□□□ -0.38
H3F3B-213ENST00000593254 VPS9D1Q9Y2B5 631 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 PADI2Q9Y2J8 665 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 CRYL1Q9Y2S2 319 aa12.67□□□□□ -0.38
H3F3B-213ENST00000593254 ZCWPW2A0A1B0GU75 182 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 GOLGA8MH3BSY2 632 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 CES2O00748 559 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 PHF2O75151 1096 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 CBX6O95503 412 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 PKMP14618 531 aaKnown RBP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 CHRM3P20309 590 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 CCL11P51671 97 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 DCDP81605 110 aaKnown RBP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 SF1Q15637 639 aaKnown RBP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 FIGLAQ6QHK4 219 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 MCATQ8IVS2 390 aaKnown RBP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 SLC34A3Q8N130 599 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 RAB42Q8N4Z0 105 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 ZBTB2Q8N680 514 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 MAGEC3Q8TD91 643 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 GRK7Q8WTQ7 553 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 FAM136AQ96C01 138 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 NDC1Q9BTX1 674 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 KCNF1Q9H3M0 494 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 SPATA7Q9P0W8 599 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.66□□□□□ -0.38
H3F3B-213ENST00000593254 GALPQ9UBC7 116 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 SLC5A6Q9Y289 635 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 KLK4Q9Y5K2 254 aa12.66□□□□□ -0.38
H3F3B-213ENST00000593254 A0A1W2PPV9 198 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 TARM1B6A8C7 271 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 DPM1O60762 260 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 CNOT3O75175 753 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms