RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 IL22Q9GZX6 179 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 SLC26A1Q9H2B4 701 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CTSFQ9UBX1 484 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 HS3ST3B1Q9Y662 390 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 COPG1Q9Y678 874 aaKnown RBP19.6■□□□□ 0.73
TRIM47-207ENST00000593089 MAU2Q9Y6X3 613 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 DOCK10Q96BY6 2186 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 HIVEP3Q5T1R4 2406 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 A0A0J9YVX5 310 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 TARM1B6A8C7 271 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 FKBP9O95302 570 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 DDAH2O95865 285 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 RPS3P23396 243 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRIM47-207ENST00000593089 MGAT1P26572 445 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 NPY2RP49146 381 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 KCTD19Q17RG1 926 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-207ENST00000593089 CTSL3PQ5NE16 218 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 WASHC2DQ5SRD0 308 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 FRMPD2BQ6IN97 320 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 CES3Q6UWW8 571 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 GSTA5Q7RTV2 222 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 CUZD1Q86UP6 607 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 PARP9Q8IXQ6 854 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 MPP5Q8N3R9 675 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 FOPNLQ96NB1 174 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 ZNF285Q96NJ3 590 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 BFARQ9NZS9 450 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 ERRFI1Q9UJM3 462 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-207ENST00000593089 NTNG1Q9Y2I2 539 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 CSAG2Q9Y5P2 127 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 MRFAP1Q9Y605 127 aa19.59■□□□□ 0.73
TRIM47-207ENST00000593089 PRRC2CQ9Y520 2896 aaKnown RBP19.58■□□□□ 0.73
TRIM47-207ENST00000593089 FITM1A5D6W6 292 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 ANKUB1A6NFN9 424 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 GOLGA8KD6RF30 607 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 GOLGA8TH3BQL2 631 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 NRP2O60462 931 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 VAPBO95292 243 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 FMO4P31512 558 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 RBBP7Q16576 425 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 HIF1AQ16665 826 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 FAM214AQ32MH5 1076 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 TUBB8Q3ZCM7 444 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 CRB2Q5IJ48 1285 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 IRAK1BP1Q5VVH5 260 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 KIRREL2Q6UWL6 708 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 OR2L3Q8NG85 312 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 UBE2Q2Q8WVN8 375 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 FAM136AQ96C01 138 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 MFSD3Q96ES6 412 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 WDR77Q9BQA1 342 aaPredicted RBP19.58■□□□□ 0.72
TRIM47-207ENST00000593089 MRM3Q9HC36 420 aaKnown RBP19.58■□□□□ 0.72
TRIM47-207ENST00000593089 SYBUQ9NX95 663 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 ZC3H7BQ9UGR2 993 aaKnown RBP19.58■□□□□ 0.72
TRIM47-207ENST00000593089 NXT1Q9UKK6 140 aaKnown RBP19.58■□□□□ 0.72
TRIM47-207ENST00000593089 DRG1Q9Y295 367 aaKnown RBP19.58■□□□□ 0.72
TRIM47-207ENST00000593089 PCDHGA10Q9Y5H3 936 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 FAM169AQ9Y6X4 670 aa19.58■□□□□ 0.72
TRIM47-207ENST00000593089 LOC105369274A0A096LPK9 316 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 LOC102723532A0A0G2JNH3 316 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 HYKKA2RU49 373 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 AP3B1O00203 1094 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 SRPX2O60687 465 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-207ENST00000593089 NIPSNAP2O75323 286 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 MED26O95402 600 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 EIF2S1P05198 315 aaKnown RBP19.57■□□□□ 0.72
TRIM47-207ENST00000593089 ARNTP27540 789 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 CCNFP41002 786 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 TERF1P54274 439 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 ELOAQ14241 798 aaKnown RBP19.57■□□□□ 0.72
TRIM47-207ENST00000593089 DRICH1Q6PGQ1 229 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-207ENST00000593089 C4orf22Q6V702 233 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 OR4N4Q8N0Y3 316 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 OR2A1Q8NGT9 310 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 HMGCLL1Q8TB92 370 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 MAGEC3Q8TD91 643 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 BIRC8Q96P09 236 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 ENAMQ9NRM1 1142 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 IL1RAPL1Q9NZN1 696 aa19.57■□□□□ 0.72
TRIM47-207ENST00000593089 MDC1Q14676 2089 aaKnown RBP19.56■□□□□ 0.72
TRIM47-207ENST00000593089 A0A1W2PPV9 198 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 KCNJ1P48048 391 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 YBX1P67809 324 aaKnown RBP19.56■□□□□ 0.72
TRIM47-207ENST00000593089 FASTKQ14296 549 aaKnown RBP19.56■□□□□ 0.72
TRIM47-207ENST00000593089 AGAP7PQ5VUJ5 663 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 MRNIPQ6NTE8 343 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 SDCCAG8Q86SQ7 713 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-207ENST00000593089 LURAP1LQ8IV03 231 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 PRSS58Q8IYP2 241 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 PPP4R1Q8TF05 950 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 LPGAT1Q92604 370 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 AGAP4Q96P64 663 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 CRB3Q9BUF7 120 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 KIFC1Q9BW19 673 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 ACAT2Q9BWD1 397 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 ZNF304Q9HCX3 659 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 SEMA3GQ9NS98 782 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 SPATA7Q9P0W8 599 aa19.56■□□□□ 0.72
TRIM47-207ENST00000593089 STOX2Q9P2F5 926 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-207ENST00000593089 NOVA2Q9UNW9 492 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms