RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MGAT1P26572 445 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 GRIA3P42263 894 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 BDKRB1P46663 353 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 KCNJ11Q14654 390 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 PRMT9Q6P2P2 845 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 FAM20CQ8IXL6 584 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 OR2L3Q8NG85 312 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 SPSB2Q99619 263 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 ZNF552Q9H707 407 aaPredicted RBP12.72□□□□□ -0.37
APOC1-209ENST00000592885 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 FAM114A2Q9NRY5 505 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 SEMA3GQ9NS98 782 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 INTS10Q9NVR2 710 aaKnown RBP12.72□□□□□ -0.37
APOC1-209ENST00000592885 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 NFS1Q9Y697 457 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 ZNF839A8K0R7 811 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 NRDCO43847 1150 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 CEP104O60308 925 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 MLNP12872 115 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 CMPK1P30085 196 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 HSD17B2P37059 387 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 EMP3P54852 163 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 RAPSNQ13702 412 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 ARHGAP19Q14CB8 494 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 NKG7Q16617 165 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 CNSTQ6PJW8 725 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 ZADH2Q8N4Q0 377 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 C2orf73Q8N5S3 287 aaPredicted RBP12.71□□□□□ -0.37
APOC1-209ENST00000592885 OR2A1Q8NGT9 310 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.37
APOC1-209ENST00000592885 LRRC4CQ9HCJ2 640 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 CIDEBQ9UHD4 219 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 CDC23Q9UJX2 597 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 FBXL4Q9UKA2 621 aa12.71□□□□□ -0.37
APOC1-209ENST00000592885 FAM237BA0A1B0GVD1 139 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 MAGEB16A2A368 324 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 OR2A25A4D2G3 310 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 MYO1CO00159 1063 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 SOCS6O14544 535 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PRPF4O43172 522 aaKnown RBP eCLIP12.7□□□□□ -0.381e-8■■■■■ 28.4
APOC1-209ENST00000592885 CTSVO60911 334 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 NIPSNAP2O75323 286 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 VPS26AO75436 327 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PSIP1O75475 530 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 DDAH2O95865 285 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 CATP04040 527 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 PKMP14618 531 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 KCNJ1P48048 391 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 VSX2P58304 361 aaPredicted RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 TUBB8Q3ZCM7 444 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 ANKRD20A4Q4UJ75 823 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PRAMEF13Q5VWM6 474 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 Q6ZS92 163 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 NEK10Q6ZWH5 1172 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 CILP2Q8IUL8 1156 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 LMNTD2Q8IXW0 634 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 OR9A1PQ8NGU1 263 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 PPP4R1Q8TF05 950 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 SSC4DQ8WTU2 575 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 SMPDL3AQ92484 453 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 MVB12AQ96EY5 273 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 MIPEPQ99797 713 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 ZFYVE21Q9BQ24 234 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 SLC6A20Q9NP91 592 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 SAMD15Q9P1V8 674 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
APOC1-209ENST00000592885 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
APOC1-209ENST00000592885 TCRBV7S3A2A0A539 114 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 HYKKA2RU49 373 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 E5RI56 91 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 PCDH17O14917 1159 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 CCNDBP1O95273 360 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 ERVK-10P10266 1014 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 CHRM3P20309 590 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 MCM3P25205 808 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 ITGA3P26006 1051 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 PSMB5P28074 263 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 FMO4P31512 558 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 GPS1Q13098 491 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 ESPL1Q14674 2120 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 RBBP7Q16576 425 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 MUM1Q2TAK8 710 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 TTLL9Q3SXZ7 439 aa12.69□□□□□ -0.38
APOC1-209ENST00000592885 PLEKHN1Q494U1 663 aaPredicted RBP12.69□□□□□ -0.38
APOC1-209ENST00000592885 CCSMST1Q4G0I0 132 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms