RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TSPAN17Q96FV3 270 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 NDC1Q9BTX1 674 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 TSPYL1Q9H0U9 437 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 PLAC1Q9HBJ0 212 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 FAM60AQ9NP50 221 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 MRPS30Q9NP92 439 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 LHX9Q9NQ69 397 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 TXLNGQ9NUQ3 528 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 MOCS1Q9NZB8 636 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 CROTQ9UKG9 612 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 MED16Q9Y2X0 877 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 AP1M2Q9Y6Q5 423 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 MGAQ8IWI9 3026 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ATMQ13315 3056 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 TARM1B6A8C7 271 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 GFYI3L273 518 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 MYO1CO00159 1063 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SLC16A5O15375 505 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF749O43361 778 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PRKAR1AP10644 381 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ALAS2P22557 587 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PSMB5P28074 263 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PHBP35232 272 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SPRP35270 261 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 CYP4F2P78329 520 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 C19orf57Q0VDD7 668 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SP140Q13342 867 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 DNASE1L3Q13609 305 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 USP10Q14694 798 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 TRADDQ15628 312 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZIC1Q15915 447 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PRAMEF17Q5VTA0 474 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 TLDC1Q6P9B6 456 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZC3HC1Q86WB0 502 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 DNAJC22Q8N4W6 341 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF655Q8N720 491 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 TTC29Q8NA56 475 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 FBXO15Q8NCQ5 510 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 LSM14AQ8ND56 463 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 OR2L3Q8NG85 312 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 FLVCR1-AS1Q8TAF5 88 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 HMGCLL1Q8TB92 370 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 DENND1AQ8TEH3 1009 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 CT55Q8WUE5 264 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF480Q8WV37 535 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 STARD8Q92502 1023 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 DLG3Q92796 817 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 MED8Q96G25 268 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SLC45A3Q96JT2 553 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 CCDC138Q96M89 665 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 CPNE1Q99829 537 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 MENTQ9BUN1 341 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SLC12A9Q9BXP2 914 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PHACTR1Q9C0D0 580 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SPRTNQ9H040 489 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 RHOJQ9H4E5 214 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PARVBQ9HBI1 364 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ARL15Q9NXU5 204 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 EURLQ9NYK6 297 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 NDOR1Q9UHB4 597 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 TAC3Q9UHF0 121 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 IL17BQ9UHF5 180 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 GPN3Q9UHW5 284 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SNX7Q9UNH6 387 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 FARSAQ9Y285 508 aaKnown RBP9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PIKFYVEQ9Y2I7 2098 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 SSUH2Q9Y2M2 353 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 PSAT1Q9Y617 370 aa9.69□□□□□ -0.86
BRCA1-227ENST00000591849 ASH1LQ9NR48 2969 aaKnown RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 A0A0J9YVX5 310 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 TCRBV9S1A1TA0A576 114 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 C21orf140B9A014 251 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 C9J4A7 227 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 MEN1O00255 615 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 NKX2-8O15522 239 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ZSCAN9O15535 394 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 PIAS1O75925 651 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 SLC16A8O95907 504 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 EIF2S1P05198 315 aaKnown RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 MSL3P1P0C860 447 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 FDXRP22570 491 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 GP5P40197 560 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ARSFP54793 590 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ABATP80404 500 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 POU4F1Q01851 419 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CBLBQ13191 982 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ERV3-1Q14264 604 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 TCTE1Q5JU00 501 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 GRTP1Q5TC63 336 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 C1orf189Q5VU69 101 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 MLIPQ5VWP3 458 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 FAM199XQ6PEV8 388 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CYS1Q717R9 158 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 NOA1Q8NC60 698 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms