RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 C18orf21Q32NC0 220 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CACHD1Q5VU97 1274 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SLC22A9Q8IVM8 553 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 STX19Q8N4C7 294 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 POF1BQ8WVV4 589 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 HERVK_113Q902F9 699 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CCDC126Q96EE4 140 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 APOL4Q9BPW4 351 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SYT17Q9BSW7 474 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 DPCDQ9BVM2 203 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SAV1Q9H4B6 383 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 EIF3KQ9UBQ5 218 aaKnown RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 FADS2P1A8MWK0 482 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 MYL3P08590 195 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CNPP09543 421 aaKnown RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CKMT1AP12532 417 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CSTF2P33240 577 aaKnown RBP eCLIP14.8□□□□□ -0.041e-14■■□□□ 12.3
CIRBP-228ENST00000590347 CAV3P56539 151 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 MFSD13AQ14CX5 517 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 QPRTQ15274 297 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 GRIK4Q16099 956 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 PYDC2Q56P42 97 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 MPZL3Q6UWV2 235 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CHMP1BQ7LBR1 199 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 KRTCAP2Q8N6L1 136 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 C2CD4AQ8NCU7 369 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SLC2A14Q8TDB8 520 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 AFG1LQ8WV93 481 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 EDEM1Q92611 657 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 TMEM203Q969S6 136 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 TRIM45Q9H8W5 580 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 ATP6V1HQ9UI12 483 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF225Q9UK10 706 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 RIMKLBQ9ULI2 386 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 KCNE2Q9Y6J6 123 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 MN1Q10571 1320 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SYPP08247 313 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 POU2F1P14859 743 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 MAGEA11P43364 429 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 RGS6P49758 472 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 MAP2K6P52564 334 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 TYW3Q6IPR3 259 aaKnown RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 RIOX2Q8IUF8 465 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 OR52B6Q8NGF0 335 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 HASPINQ8TF76 798 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 SPATA9Q9BWV2 254 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 FAM126AQ9BYI3 521 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 RGS18Q9NS28 235 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 CFL2Q9Y281 166 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 LOXHD1Q8IVV2 1947 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 DCLK1O15075 740 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 PSIP1O75475 530 aaKnown RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 JUNDP17535 347 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 POU1F1P28069 291 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 HUNKP57058 714 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 FOXM1Q08050 763 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 ITKQ08881 620 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 FAM174BQ3ZCQ3 159 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 C6orf136Q5SQH8 315 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 OTUD1Q5VV17 481 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 GARNL3Q5VVW2 1013 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 KANK2Q63ZY3 851 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 CPZQ66K79 652 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 SMYD5Q6GMV2 418 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 SVOPLQ8N434 492 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 USP7Q93009 1102 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 ISG20Q96AZ6 181 aaKnown RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 MRGPRX2Q96LB1 330 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 KATNAL1Q9BW62 490 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 SAMHD1Q9Y3Z3 626 aaKnown RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 V9GYH0 126 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 LOC102723532A0A0G2JNH3 316 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 ELOVL7A1L3X0 281 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 GFRA2O00451 464 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 PAMP19021 973 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 EFNA1P20827 205 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 RPL35P42766 123 aaKnown RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 C2orf80Q0P641 193 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 NR6A1Q15406 480 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 FAM171A1Q5VUB5 890 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF548Q8NEK5 533 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-228ENST00000590347 OR52J3Q8NH60 311 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 MTERF3Q96E29 417 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 TEKT5Q96M29 485 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 ZMYM5Q9UJ78 669 aa14.79□□□□□ -0.04
CIRBP-228ENST00000590347 MGAMO43451 1857 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 CDC7O00311 574 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 SYN3O14994 580 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 CREG1O75629 220 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 GPX5O75715 221 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 SLC22A5O76082 557 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 ALDH1A1P00352 501 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 HRGP04196 525 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 MTHFD2P13995 350 aa14.78□□□□□ -0.04
CIRBP-228ENST00000590347 RAD51Q06609 339 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms