RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PDCD2Q16342 344 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 HLA-BQ31612 363 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 TRIM61Q5EBN2 209 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 GKAP1Q5VSY0 366 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 LCTLQ6UWM7 567 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 KANSL1Q7Z3B3 1105 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 MILR1Q7Z6M3 343 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ZNF761Q86XN6 746 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ARL14Q8N4G2 192 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 RAB42Q8N4Z0 105 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 CDYL2Q8N8U2 506 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 OR4E2Q8NGC2 313 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 OR2I1PQ8NGU4 316 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 HMGCLL1Q8TB92 370 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 LCN9Q8WX39 176 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SMPDL3AQ92484 453 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SEC16BQ96JE7 1060 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 EBF4Q9BQW3 602 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ACAT2Q9BWD1 397 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 RAB11FIP5Q9BXF6 653 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 NUF2Q9BZD4 464 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SMOC1Q9H4F8 434 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ACTR8Q9H981 624 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 TAC3Q9UHF0 121 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 TRPS1Q9UHF7 1281 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SLC6A14Q9UN76 642 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 STK38LQ9Y2H1 464 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 PTGDR2Q9Y5Y4 395 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 KCNE1BA0A087WTH5 132 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 ZNF839A8K0R7 811 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SLCO1B7G3V0H7 640 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 BTN3A3O00478 584 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 GIPC1O14908 333 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 HDAC3O15379 428 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 PRICKLE3O43900 615 aaPredicted RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 CRCPO75575 148 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CLDN9O95484 217 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 UROSP10746 265 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 HGFP14210 728 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CD22P20273 847 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CCND1P24385 295 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 VARSP26640 1264 aaKnown RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 SHMT2P34897 504 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 MPLP40238 635 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 ARRB1P49407 418 aaPredicted RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 IDH3AP50213 366 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 HTR6P50406 440 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 HK2P52789 917 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 ARFIP2P53365 341 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 HHEXQ03014 270 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CHIT1Q13231 466 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 DOC2AQ14183 400 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 PLCL1Q15111 1095 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SLC9B1Q4ZJI4 515 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CATSPEREQ5SY80 951 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 THEMIS2Q5TEJ8 643 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 OGFOD3Q6PK18 319 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 EPGNQ6UW88 154 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SLCO4C1Q6ZQN7 724 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 RABEPKQ7Z6M1 372 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 TMPRSS11BQ86T26 416 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SLC9B2Q86UD5 537 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 AMIGO1Q86WK6 493 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 C17orf82Q86X59 251 aaPredicted RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 GATAD2AQ86YP4 633 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SDR16C5Q8N3Y7 309 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 KYQ8NBH2 561 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CCDC197Q8NCU1 140 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SETD7Q8WTS6 366 aaKnown RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 TWIST2Q8WVJ9 160 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 NEIL2Q969S2 332 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 MIPEPQ99797 713 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 TWSG1Q9GZX9 223 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 ARRDC1-AS1Q9H2J1 176 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 TUBB1Q9H4B7 451 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 WDR55Q9H6Y2 383 aaPredicted RBP10.92□□□□□ -0.66
VMP1-207ENST00000588131 GAREM1Q9H706 876 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 SPHK1Q9NYA1 384 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 KCNK4Q9NYG8 393 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 GPRC5BQ9NZH0 403 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 VTI1BQ9UEU0 232 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 BTRCQ9Y297 605 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 DYRK1BQ9Y463 629 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 DNAJC15Q9Y5T4 150 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 CSNK1G3Q9Y6M4 447 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 GON4LQ3T8J9 2241 aa10.92□□□□□ -0.66
VMP1-207ENST00000588131 ARHGEF17Q96PE2 2063 aaPredicted RBP10.91□□□□□ -0.66
VMP1-207ENST00000588131 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 SDHDO14521 159 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 FFAR3O14843 346 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 CLGNO14967 610 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 PIP5K1BO14986 540 aa10.91□□□□□ -0.66
VMP1-207ENST00000588131 PPM1DO15297 605 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms