RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 NKG7Q16617 165 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 EIF2S3LQ2VIR3 472 aaKnown RBP13.73□□□□□ -0.21
VMP1-206ENST00000587945 ACSBG2Q5FVE4 666 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.73□□□□□ -0.21
VMP1-206ENST00000587945 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 WASHC2DQ5SRD0 308 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 FHL5Q5TD97 284 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 HIST2H2BCQ6DN03 193 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 TTC27Q6P3X3 843 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
VMP1-206ENST00000587945 HPS6Q86YV9 775 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 OR4N4Q8N0Y3 316 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 RAB42Q8N4Z0 105 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
VMP1-206ENST00000587945 TTC29Q8NA56 475 aaPredicted RBP13.73□□□□□ -0.21
VMP1-206ENST00000587945 TRIM58Q8NG06 486 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 OR2A1Q8NGT9 310 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 ZUFSPQ96AP4 578 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 ZNF285Q96NJ3 590 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 SPSB2Q99619 263 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 LRRC4CQ9HCJ2 640 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 C5AR2Q9P296 337 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 CDC23Q9UJX2 597 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 FBXL4Q9UKA2 621 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 TARM1B6A8C7 271 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 AGPSO00116 658 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 SOCS6O14544 535 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 ONECUT2O95948 504 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 IGHEP01854 428 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 ALPPP05187 535 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 EIF2S1P05198 315 aaKnown RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 RNF224P0DH78 156 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 MMP11P24347 488 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 CCNFP41002 786 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 CCZ1BP86790 482 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 GBX1Q14549 363 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 RNF187Q5TA31 235 aaPredicted RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 KIAA0930Q6ICG6 404 aaPredicted RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 CASC4Q6P4E1 433 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 SUSD1Q6UWL2 747 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 CENPUQ71F23 418 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 LRRC8AQ8IWT6 810 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 FKBP10Q96AY3 582 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 SNRNP40Q96DI7 357 aaKnown RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 MS4A14Q96JA4 679 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 MESP1Q9BRJ9 268 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 ATP13A2Q9NQ11 1180 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 B3GNT3Q9Y2A9 372 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 NAV2Q8IVL1 2488 aa13.72□□□□□ -0.21
VMP1-206ENST00000587945 USP9XQ93008 2570 aaPredicted RBP13.72□□□□□ -0.21
VMP1-206ENST00000587945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 HYKKA2RU49 373 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 FITM1A5D6W6 292 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 H3BMM5 538 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 GOLGA8MH3BSY2 632 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 SRPX2O60687 465 aaPredicted RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 FKBP9O95302 570 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 MATN4O95460 622 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 KRT14P02533 472 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 ALBP02768 609 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 ESR1P03372 595 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 PIM1P11309 404 aaPredicted RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 PKMP14618 531 aaKnown RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 ITGA3P26006 1051 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 MAGEA6P43360 314 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 TSTA3Q13630 321 aaPredicted RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.21
VMP1-206ENST00000587945 FBXO42Q6P3S6 717 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 KIRREL2Q6UWL6 708 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 CILP2Q8IUL8 1156 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 PRSS58Q8IYP2 241 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 OR9A1PQ8NGU1 263 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 MAGEC3Q8TD91 643 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 INPP5DQ92835 1189 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 TCF12Q99081 682 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 SLC30A3Q99726 388 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 WDR54Q9H977 334 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 HOMER3Q9NSC5 361 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 SPATA7Q9P0W8 599 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 KLK4Q9Y5K2 254 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 MRFAP1Q9Y605 127 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 FAM169AQ9Y6X4 670 aa13.71□□□□□ -0.21
VMP1-206ENST00000587945 OR2A25A4D2G3 310 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 E5RI56 91 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 PFDN6O15212 129 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 PAMP19021 973 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms