RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NXPE2Q96DL1 559 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 TRAPPC9Q96Q05 1148 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 ATOH8Q96SQ7 321 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 SGPP1Q9BX95 441 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 PCMTD2Q9NV79 361 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 ARGLU1Q9NWB6 273 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-204ENST00000586558 NUDT4Q9NZJ9 180 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 KLK4Q9Y5K2 254 aa18.48■□□□□ 0.55
DDX39A-204ENST00000586558 SLC9B1P1A6NJY1 282 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 IPO13O94829 963 aaKnown RBP18.47■□□□□ 0.55
DDX39A-204ENST00000586558 GSTA1P08263 222 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 ST6GAL1P15907 406 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 CMPK1P30085 196 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 GLRBP48167 497 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SEPHS1P49903 392 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 FOXK2Q01167 660 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 NAE1Q13564 534 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 TSTA3Q13630 321 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-204ENST00000586558 C3orf38Q5JPI3 329 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 TMTC4Q5T4D3 741 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 THEMIS2Q5TEJ8 643 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SULT1C3Q6IMI6 304 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 CAPN13Q6MZZ7 669 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SUSD1Q6UWL2 747 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 LRIG3Q6UXM1 1119 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 TRIM73Q86UV7 250 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 D2HGDHQ8N465 521 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 PDPRQ8NCN5 879 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 PPFIBP2Q8ND30 876 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 OR2L3Q8NG85 312 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 OR56A3Q8NH54 315 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 RHBDF1Q96CC6 855 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 TCTN2Q96GX1 697 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 PPM1MQ96MI6 270 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 CNOT10Q9H9A5 744 aaKnown RBP18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SOHLH2Q9NX45 425 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SIDT1Q9NXL6 827 aaKnown RBP18.47■□□□□ 0.55
DDX39A-204ENST00000586558 CD274Q9NZQ7 290 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 TAC3Q9UHF0 121 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 SATB2Q9UPW6 733 aa18.47■□□□□ 0.55
DDX39A-204ENST00000586558 A0A1W2PNU3 283 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-204ENST00000586558 MSL3P1P0C860 447 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PYGBP11216 843 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PSMB5P28074 263 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 RAB15P59190 212 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 GABREP78334 506 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PRDX1Q06830 199 aaKnown RBP18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ZNF844Q08AG5 666 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 KRT71Q3SY84 523 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 TECRLQ5HYJ1 363 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PRAMEF13Q5VWM6 474 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ICE2Q659A1 982 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 FAM129CQ86XR2 697 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 LSMEM2Q8N112 164 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 CYP4X1Q8N118 509 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PLD6Q8N2A8 252 aaKnown RBP18.46■□□□□ 0.55
DDX39A-204ENST00000586558 BMPERQ8N8U9 685 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 C19orf47Q8N9M1 422 aaKnown RBP18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ZUFSPQ96AP4 578 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 MED8Q96G25 268 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 MIPEPQ99797 713 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 HAUS8Q9BT25 410 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ACAT2Q9BWD1 397 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 B3GNT4Q9C0J1 378 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ATG10Q9H0Y0 220 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 PDE7BQ9NP56 450 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 ANKMY1Q9P2S6 941 aa18.46■□□□□ 0.55
DDX39A-204ENST00000586558 TRABD2BA6NFA1 517 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 EFCAB7A8K855 629 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 SUPT3HB4E1H0 165 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 TARM1B6A8C7 271 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 SUPT3HO75486 399 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 DXOO77932 396 aaKnown RBP18.45■□□□□ 0.54
DDX39A-204ENST00000586558 PVRP15151 417 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 MAGP20916 626 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 HRH2P25021 359 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 GGT5P36269 586 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 KCNC1P48547 511 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 MC2RQ01718 297 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 ACY1Q03154 408 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 KIAA1614Q5VZ46 1190 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 LCTLQ6UWM7 567 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 KLHDC8AQ8IYD2 350 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 MRPL57Q9BQC6 102 aaKnown RBP18.45■□□□□ 0.54
DDX39A-204ENST00000586558 MRPL46Q9H2W6 279 aaKnown RBP18.45■□□□□ 0.54
DDX39A-204ENST00000586558 MRPS30Q9NP92 439 aaKnown RBP18.45■□□□□ 0.54
DDX39A-204ENST00000586558 FBXO8Q9NRD0 319 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 WWOXQ9NZC7 414 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 PISDQ9UG56 409 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 DCDC2Q9UHG0 476 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 TMCO1Q9UM00 188 aa18.45■□□□□ 0.54
DDX39A-204ENST00000586558 SPEGQ15772 3267 aa18.44■□□□□ 0.54
DDX39A-204ENST00000586558 A0A1W2PPM1 405 aa18.44■□□□□ 0.54
DDX39A-204ENST00000586558 NCF1BA6NI72 391 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-204ENST00000586558 NCF1CA8MVU1 366 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-204ENST00000586558 GOLGA8RI6L899 631 aa18.44■□□□□ 0.54
DDX39A-204ENST00000586558 FGF3P11487 239 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-204ENST00000586558 CCL4P13236 92 aa18.44■□□□□ 0.54
DDX39A-204ENST00000586558 HGFP14210 728 aa18.44■□□□□ 0.54
DDX39A-204ENST00000586558 NCF1P14598 390 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms