RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 LINC00032P0C843 101 aa6□□□□□ -1.45
LIG3-206ENST00000586058 THRAP10827 490 aa6□□□□□ -1.45
LIG3-206ENST00000586058 PCNAP12004 261 aa6□□□□□ -1.45
LIG3-206ENST00000586058 HSD3B1P14060 373 aa6□□□□□ -1.45
LIG3-206ENST00000586058 JUNDP17535 347 aa6□□□□□ -1.45
LIG3-206ENST00000586058 DDX5P17844 614 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 AOC1P19801 751 aa6□□□□□ -1.45
LIG3-206ENST00000586058 HSD3B2P26439 372 aa6□□□□□ -1.45
LIG3-206ENST00000586058 CMPK1P30085 196 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ARRB2P32121 409 aa6□□□□□ -1.45
LIG3-206ENST00000586058 GDF5P43026 501 aa6□□□□□ -1.45
LIG3-206ENST00000586058 CCR10P46092 362 aa6□□□□□ -1.45
LIG3-206ENST00000586058 PXNP49023 591 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 RAB28P51157 221 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ATP4BP51164 291 aa6□□□□□ -1.45
LIG3-206ENST00000586058 AFF3P51826 1226 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 KCNK10P57789 538 aa6□□□□□ -1.45
LIG3-206ENST00000586058 HNRNPKP61978 463 aaKnown RBP eCLIP6□□□□□ -1.45
LIG3-206ENST00000586058 ERVK-8P63133 956 aa6□□□□□ -1.45
LIG3-206ENST00000586058 RPL38P63173 70 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 TRAF3Q13114 568 aa6□□□□□ -1.45
LIG3-206ENST00000586058 FASTKQ14296 549 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 KIR2DS5Q14953 304 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KRT72Q14CN4 511 aa6□□□□□ -1.45
LIG3-206ENST00000586058 CPSF6Q16630 551 aaKnown RBP eCLIP6□□□□□ -1.45
LIG3-206ENST00000586058 SMU1Q2TAY7 513 aa6□□□□□ -1.45
LIG3-206ENST00000586058 LSM12Q3MHD2 195 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 LACTB2Q53H82 288 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 EEF1AKMT2Q5JPI9 291 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 CES4AQ5XG92 561 aa6□□□□□ -1.45
LIG3-206ENST00000586058 LYSMD4Q5XG99 296 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ARMC6Q6NXE6 501 aa6□□□□□ -1.45
LIG3-206ENST00000586058 MED27Q6P2C8 311 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KLHL35Q6PF15 583 aa6□□□□□ -1.45
LIG3-206ENST00000586058 FOXR1Q6PIV2 292 aa6□□□□□ -1.45
LIG3-206ENST00000586058 C6orf89Q6UWU4 347 aa6□□□□□ -1.45
LIG3-206ENST00000586058 C16orf89Q6UX73 402 aa6□□□□□ -1.45
LIG3-206ENST00000586058 WASH2PQ6VEQ5 465 aa6□□□□□ -1.45
LIG3-206ENST00000586058 FAM83HQ6ZRV2 1179 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 RNF165Q6ZSG1 346 aa6□□□□□ -1.45
LIG3-206ENST00000586058 TAF8Q7Z7C8 310 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SLC9B2Q86UD5 537 aa6□□□□□ -1.45
LIG3-206ENST00000586058 OOSP2Q86WS3 158 aa6□□□□□ -1.45
LIG3-206ENST00000586058 RBM12BQ8IXT5 1001 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 KLHDC8AQ8IYD2 350 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SDR16C5Q8N3Y7 309 aa6□□□□□ -1.45
LIG3-206ENST00000586058 LILRA3Q8N6C8 439 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 PPFIBP2Q8ND30 876 aa6□□□□□ -1.45
LIG3-206ENST00000586058 OR56A3Q8NH54 315 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ZNF480Q8WV37 535 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SLC5A11Q8WWX8 675 aa6□□□□□ -1.45
LIG3-206ENST00000586058 LCN9Q8WX39 176 aa6□□□□□ -1.45
LIG3-206ENST00000586058 OR1E3Q8WZA6 343 aa6□□□□□ -1.45
LIG3-206ENST00000586058 EDAQ92838 391 aa6□□□□□ -1.45
LIG3-206ENST00000586058 TSACCQ96A04 125 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 SCARF2Q96GP6 870 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 NSL1Q96IY1 281 aa6□□□□□ -1.45
LIG3-206ENST00000586058 MAELQ96JY0 434 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 SLC6A18Q96N87 628 aa6□□□□□ -1.45
LIG3-206ENST00000586058 CDK15Q96Q40 435 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KCNA7Q96RP8 456 aa6□□□□□ -1.45
LIG3-206ENST00000586058 AIF1LQ9BQI0 150 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ZDHHC5Q9C0B5 715 aa6□□□□□ -1.45
LIG3-206ENST00000586058 PITHD1Q9GZP4 211 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 EHD1Q9H4M9 534 aa6□□□□□ -1.45
LIG3-206ENST00000586058 WDR55Q9H6Y2 383 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 PELI2Q9HAT8 420 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KCNK13Q9HB14 408 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ZBTB26Q9HCK0 441 aa6□□□□□ -1.45
LIG3-206ENST00000586058 WASH6PQ9NQA3 447 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SPASTQ9UBP0 616 aa6□□□□□ -1.45
LIG3-206ENST00000586058 MBD1Q9UIS9 605 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 G3BP2Q9UN86 482 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
LIG3-206ENST00000586058 TMED5Q9Y3A6 229 aa6□□□□□ -1.45
LIG3-206ENST00000586058 RRP15Q9Y3B9 282 aaKnown RBP6□□□□□ -1.45
LIG3-206ENST00000586058 TIMM22Q9Y584 194 aa6□□□□□ -1.45
LIG3-206ENST00000586058 PCDHB11Q9Y5F2 797 aa6□□□□□ -1.45
LIG3-206ENST00000586058 DNAJC15Q9Y5T4 150 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ATP6AP2A0A1C7CYW4 349 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ARHGAP10A1A4S6 786 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 DYTNA2CJ06 578 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 FAM221BA6H8Z2 402 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ANKDD1BA6NHY2 528 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ISM1B1AKI9 464 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 E7EQ34 232 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 PSMD12O00232 456 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 UBFD1O14562 309 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 PEX11AO75192 247 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SEC22BO75396 215 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ATP6AP2O75787 350 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CIB2O75838 187 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 DNAJC8O75937 253 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 RSL1D1O76021 490 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 HRH2P25021 359 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 GSTM2P28161 218 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ACADLP28330 430 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 PTPN4P29074 926 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SLC19A1P41440 591 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SCTRP47872 440 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms