RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PNLIPRP1P54315 467 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 SHC2P98077 582 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ARHGAP19Q14CB8 494 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 IRF4Q15306 451 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 SNCBQ16143 134 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 KIF19Q2TAC6 998 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 TRMT5Q32P41 509 aaKnown RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 FBXW10Q5XX13 1052 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 METRNLQ641Q3 311 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CAPN13Q6MZZ7 669 aaPredicted RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 Q6ZSR9 355 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 NET1Q7Z628 596 aaPredicted RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 C11orf96Q7Z7L8 435 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 TRIM74Q86UV6 250 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 PGAM4Q8N0Y7 254 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 FRMD1Q8N878 549 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 OR9A1PQ8NGU1 263 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 OR2T34Q8NGX1 318 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 USP7Q93009 1102 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 RAD51AP1Q96B01 352 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ROPN1LQ96C74 230 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 METTL2AQ96IZ6 378 aaKnown RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 MRGPRX1Q96LB2 322 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 EDEM2Q9BV94 578 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 BRINP2Q9C0B6 783 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 OR52A5Q9H2C5 316 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 AIG1Q9NVV5 245 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ASIC5Q9NY37 505 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 NOP53Q9NZM5 478 aaKnown RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 STOX2Q9P2F5 926 aaPredicted RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 GULP1Q9UBP9 304 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ANGPTL2Q9UKU9 493 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 EIF3LQ9Y262 564 aaKnown RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 BTRCQ9Y297 605 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 TMEM98Q9Y2Y6 226 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 PI4KAP42356 2102 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 IGF2RP11717 2491 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 A0A1B0GTL3 188 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PCNX2A6NKB5 2137 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PATE3B3GLJ2 98 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 AIM2O14862 343 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 NRP2O60462 931 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PEX11AO75192 247 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ATP6V1G2O95670 118 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 NPPAP01160 153 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ALDOCP09972 364 aaKnown RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 HSD3B1P14060 373 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 JUPP14923 745 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ACPPP15309 386 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 GNAZP19086 355 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ITGAXP20702 1163 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PRPH2P23942 346 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 HSD3B2P26439 372 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 MAPK1P28482 360 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PDHA2P29803 388 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 OXTRP30559 389 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 KIAA1024LP59773 190 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PFN3P60673 137 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 SLC25A3Q00325 362 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 IRF8Q02556 426 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 NAE1Q13564 534 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 FGL2Q14314 439 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 GRB7Q14451 532 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 IMPG1Q17R60 797 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 C6orf136Q5SQH8 315 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PGM2L1Q6PCE3 622 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 CRTC3Q6UUV7 619 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PDZD3Q86UT5 571 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 C11orf74Q86VG3 221 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 THOC6Q86W42 341 aaKnown RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 ULK2Q8IYT8 1036 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 RAB42Q8N4Z0 105 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 FNDC5Q8NAU1 212 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 FOXJ1Q92949 421 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 REPS1Q96D71 796 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PKP4Q99569 1192 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 APOOQ9BUR5 198 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 BTBD1Q9H0C5 482 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 PCBD2Q9H0N5 130 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ELOVL6Q9H5J4 265 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 MBNL1Q9NR56 388 aaKnown RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 GID8Q9NWU2 228 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 KLQ9UEF7 1012 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 BAIAP2L1Q9UHR4 511 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 ZNF490Q9ULM2 529 aaPredicted RBP10.08□□□□□ -0.8
LIG3-203ENST00000585370 SLC22A14Q9Y267 594 aa10.08□□□□□ -0.8
LIG3-203ENST00000585370 SLC17A4Q9Y2C5 497 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms